| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cysH
Identifier: 227080598
GI number: 227080598
Start: 385173
End: 385934
Strand: Direct
Name: cysH
Synonym: VCM66_0371
Alternate gene names: 227080598
Gene position: 385173-385934 (Clockwise)
Preceding gene: 227080597
Following gene: 227080599
Centisome position: 13.32
GC content: 45.41
Gene sequence:
>762_bases ATGCCTAATCGTACCGTTCCAACACTAGAAGAGTTACTAACGTTAAATAAGGTGCAGCAAACGCTGCGCCTAACGGAAGT CAATCAGCATCTGGAATCCCTCACTGCGCAAGAGCGCGTCGTCTGGGGTCTAGAAAATCTGCAGGGCAATCATGCACTGT CATCGAGCTTTGGTATCCAAGCCGCAGTGATGCTTCATTTATTAACTTCAGTGAAGAGTGACATTCCTGTCGTTTTAACC GATACCGGCTATCTGTTCCCAGAAACCTATCAGTTTATCGATGAGTTGACTGAGCGGCTCAATCTGAACTTAAAAGTTTA CTCCGCGCCTGTATCAGCGGCTTGGCAAGAAGCTCGCTACGGAAAACTGTGGGAACAAGGTGTTGAAGGAATCGAACGCT ACAACCAGATTAATAAAGTAGAACCGATGCGTAGAGCATTAGATGAACTCAACATTGGCACTTGGTTCTCGGGCTTACGA CGTGAACAGTCACAATCACGAGCAAGCCTACCGATTCTATCGGTACAAAATGGCGTGTTTAAATTCCTGCCAGTGATCGA TTGGACCAATAAAGAGGTGCACTATTATCTCAAGGATAACGATCTACCTTATCACCCACTTTGGGAACAAGGTTATCTTT CGGTTGGTGATACACACACCACACAGAAATGGCAGCCGGGAATGAATGAAGAGCAAACTCGCTTCTTTGGTTTAAAGCGT GAGTGTGGGTTACACGAAGATCATAACGATACACATCAATAA
Upstream 100 bases:
>100_bases GGACGTTGGGCTAGCGAGCGTCTGGACGGTGAAGGATTTGGTGATTTCACTATTCGTGCAGGCATTATCGAAGAGGTAAT CATCTCGAAGAGGGATTTCT
Downstream 100 bases:
>100_bases ACGCGTTCATTTTCTATTTACACATAATAAAGAGAGGCTGCCGTGATGTAGCCTCTTGCTTTATCTCAGCCTACAAATGA ATAACTCTGTGGATAAGTTG
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPNRTVPTLEELLTLNKVQQTLRLTEVNQHLESLTAQERVVWGLENLQGNHALSSSFGIQAAVMLHLLTSVKSDIPVVLT DTGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARYGKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLR REQSQSRASLPILSVQNGVFKFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPGMNEEQTRFFGLKR ECGLHEDHNDTHQ
Sequences:
>Translated_253_residues MPNRTVPTLEELLTLNKVQQTLRLTEVNQHLESLTAQERVVWGLENLQGNHALSSSFGIQAAVMLHLLTSVKSDIPVVLT DTGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARYGKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLR REQSQSRASLPILSVQNGVFKFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPGMNEEQTRFFGLKR ECGLHEDHNDTHQ >Mature_252_residues PNRTVPTLEELLTLNKVQQTLRLTEVNQHLESLTAQERVVWGLENLQGNHALSSSFGIQAAVMLHLLTSVKSDIPVVLTD TGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARYGKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLRR EQSQSRASLPILSVQNGVFKFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPGMNEEQTRFFGLKRE CGLHEDHNDTHQ
Specific function: Reduction of activated sulfate into sulfite
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily
Homologues:
Organism=Escherichia coli, GI1789121, Length=238, Percent_Identity=70.1680672268908, Blast_Score=356, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6325425, Length=226, Percent_Identity=33.6283185840708, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSH_VIBC3 (A5F3I6)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F3I6 - SMR: A5F3I6 - STRING: A5F3I6 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A2797 - eggNOG: COG0175 - HOGENOM: HBG758022 - OMA: QVNPSAK - ProtClustDB: PRK02090 - BioCyc: VCHO345073:VC0395_A2797-MONOMER - GO: GO:0005737 - HAMAP: MF_00063 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00434 - TIGRFAMs: TIGR02057
Pfam domain/function: PF01507 PAPS_reduct
EC number: =1.8.4.8
Molecular weight: Translated: 29249; Mature: 29118
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRTVPTLEELLTLNKVQQTLRLTEVNQHLESLTAQERVVWGLENLQGNHALSSSFGIQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHH AAVMLHLLTSVKSDIPVVLTDTGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARY HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH GKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLRREQSQSRASLPILSVQNGVF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCHH KFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPGMNEEQTRFFGLKR HHHHCEECCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCHH ECGLHEDHNDTHQ HCCCCCCCCCCCC >Mature Secondary Structure PNRTVPTLEELLTLNKVQQTLRLTEVNQHLESLTAQERVVWGLENLQGNHALSSSFGIQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHH AAVMLHLLTSVKSDIPVVLTDTGYLFPETYQFIDELTERLNLNLKVYSAPVSAAWQEARY HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH GKLWEQGVEGIERYNQINKVEPMRRALDELNIGTWFSGLRREQSQSRASLPILSVQNGVF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCHH KFLPVIDWTNKEVHYYLKDNDLPYHPLWEQGYLSVGDTHTTQKWQPGMNEEQTRFFGLKR HHHHCEECCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHCCHH ECGLHEDHNDTHQ HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA