Click here to switch to the map view.

The map label for this gene is yheO [H]

Identifier: 227080567

GI number: 227080567

Start: 361295

End: 362017

Strand: Direct

Name: yheO [H]

Synonym: VCM66_0339

Alternate gene names: 227080567

Gene position: 361295-362017 (Clockwise)

Preceding gene: 227080566

Following gene: 227080568

Centisome position: 12.49

GC content: 46.2

Gene sequence:

>723_bases
GTGACAATGACAGAAACCATGAATGTCGATTTACTGCTTGAGATGGAATCGGTGCACGTAAAGCCGTTTACGGAGCACGA
TAAAGTGATTCTGCGCTCTTACGAGGCGGTAGTTGATGGTATCGCGAGCCTGATTGGCCCATTTTGTGAAATCGTTCTGC
ACTCGCTTGAAGATCTCAATACATCGGCGATCAAGATTGCCAATGGTGAAAACACAGGCCGTCAAGTGGGATCGCCAATT
ACCGATATGGCCTTGAAAATGCTGCGTGATATAGAAGGATCTGAGCGTAACTTCTCCCGCTCTTATTTCACGCGCGCCAA
AGGTGGCGTATTGATGAAATCGATCACAGTTGCGATCCGTAACGGTGAGAATCGAGTGATTGGTCTACTCTGTATCAACG
TCAACCTCGATGCGCCTTTCTCACAAGTACTGAAATCGTTTATGCCAACTCAAGAAGCGCAAGAGGCGGCCTCTTCGGTT
AACTTTGCCAGTGATGTGGAAGAGCTGGTGGATCAAACCGTTGAACGTACCATCGAAGAAATCAACGGTGATAAGTCAGT
CTCGAACAATACCAAAAATCGTCAAATCGTGATGGCGTTGTTCGATAAGGGGATTTTCGACATTAAAGATGCGATCAACC
GAGTCGCCGATCGGCTGAATATCTCTAAACATACTGTGTATCTCTATATTCGTCAGCGTAAAACTGAGGATGATGAGAAG
TGA

Upstream 100 bases:

>100_bases
GTCCTAAATCACTTGTTGGTGATATTCAAGAATCGTGGTTTAAAATTTTCTGATAAACTTACAGCAATTTGTTGATTTTT
CATTCTAAGGTTTAAGCACA

Downstream 100 bases:

>100_bases
AACCACTCACTTACACCTTAGTCGTGAACGGGCCACAATACGGTACGCAATCGGCTCGCAACGCCTATCTGTTTGCTAAA
GCGCTGATTGAGAAAGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTMTETMNVDLLLEMESVHVKPFTEHDKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLNTSAIKIANGENTGRQVGSPI
TDMALKMLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIRNGENRVIGLLCINVNLDAPFSQVLKSFMPTQEAQEAASSV
NFASDVEELVDQTVERTIEEINGDKSVSNNTKNRQIVMALFDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKTEDDEK

Sequences:

>Translated_240_residues
MTMTETMNVDLLLEMESVHVKPFTEHDKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLNTSAIKIANGENTGRQVGSPI
TDMALKMLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIRNGENRVIGLLCINVNLDAPFSQVLKSFMPTQEAQEAASSV
NFASDVEELVDQTVERTIEEINGDKSVSNNTKNRQIVMALFDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKTEDDEK
>Mature_239_residues
TMTETMNVDLLLEMESVHVKPFTEHDKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLNTSAIKIANGENTGRQVGSPIT
DMALKMLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIRNGENRVIGLLCINVNLDAPFSQVLKSFMPTQEAQEAASSVN
FASDVEELVDQTVERTIEEINGDKSVSNNTKNRQIVMALFDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKTEDDEK

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0575 [H]

Homologues:

Organism=Escherichia coli, GI87082246, Length=224, Percent_Identity=67.4107142857143, Blast_Score=316, Evalue=1e-87,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013559
- ProDom:   PD037769 [H]

Pfam domain/function: PF08348 PAS_6 [H]

EC number: NA

Molecular weight: Translated: 26874; Mature: 26743

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTETMNVDLLLEMESVHVKPFTEHDKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLN
CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSAIKIANGENTGRQVGSPITDMALKMLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIR
CCEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHEEEEEE
NGENRVIGLLCINVNLDAPFSQVLKSFMPTQEAQEAASSVNFASDVEELVDQTVERTIEE
CCCCEEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
INGDKSVSNNTKNRQIVMALFDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKTEDDEK
CCCCCCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
TMTETMNVDLLLEMESVHVKPFTEHDKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLN
CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSAIKIANGENTGRQVGSPITDMALKMLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIR
CCEEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHEEEEEE
NGENRVIGLLCINVNLDAPFSQVLKSFMPTQEAQEAASSVNFASDVEELVDQTVERTIEE
CCCCEEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
INGDKSVSNNTKNRQIVMALFDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKTEDDEK
CCCCCCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]