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The map label for this gene is acrR [C]

Identifier: 227080545

GI number: 227080545

Start: 336322

End: 337050

Strand: Direct

Name: acrR [C]

Synonym: VCM66_0317

Alternate gene names: 227080545

Gene position: 336322-337050 (Clockwise)

Preceding gene: 227080544

Following gene: 227080546

Centisome position: 11.63

GC content: 45.68

Gene sequence:

>729_bases
GTGAAAAGCGTCTGCAGGTCAGACGCTTTTCACATCTTGAGCCCGACTGTTTTATACTTCGGTAATCCAGACAGAAAGAC
GAAGCGAATCATGATGAAAACTAAGGATCGCATAGTGCATGCGGCACTTGAGCTGTTTAATCAGCAAGGTGAACGTAACA
TCACGACTAACCATATCGCTGCTCATATTGAGATCAGCCCAGGTAATTTGTATTACCACTTTCGCAATAAGCAGGAGATA
GTGCGTGATATTTTTGCGCTCTACTCGGCGGAGCTGATTGAGCGTTTTACTCCGCTACAAGGTCAGTATGAGAGCCTTTC
TCTACTCAAGCACTATTTGGATTCGATTTTCACTCTGATGTGGAAATACCGTTTTTTCTATGCCAATTTGCCGGAAATCT
TGCAGCGCGATGAAGAGTTGCATGCTGACTACATTCGGGTTCAAGAACGATTACAGACCAATTTGATTGATATCGTGCGT
AATTTTGTCAATCTGCAACTGCTGGAGTTGAATGAGGATGAGATGCCGAAACTGGTGCGGACTCTGCATCTGATTGCGTC
TAGCTGGCTTGGTTATCAATCGGCGATGTCACACAAAACTCAGATCACGGAAGAGGTGATTCATCAAGGCATGTTGCAGA
TGATCTCGGTCGTTAAACCTTGTGCCACTAAGGCGGGGCGTGAACAGCTTCAACTGCTTGAAGAAGGTGTGCGAGCTATG
CATGCCTGA

Upstream 100 bases:

>100_bases
ACTTGGGGCATGGTATTCATTTGGACGTGCCGCCTGAAAATGCCGGTGTGTTTGTTGAAGCGGTGCATGAGCTTTCGAAG
CCGTACCATCCATAGTAAAC

Downstream 100 bases:

>100_bases
GCATGAGTTATAACCAATCTGTCTTGGGCATGGAGCCGATTCGTTGCTAACTTCCTGAACATTTCCAGCCAGAAAGGAAG
CTTTACGTGGATTACGATGT

Product: transcriptional reguator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKSVCRSDAFHILSPTVLYFGNPDRKTKRIMMKTKDRIVHAALELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQEI
VRDIFALYSAELIERFTPLQGQYESLSLLKHYLDSIFTLMWKYRFFYANLPEILQRDEELHADYIRVQERLQTNLIDIVR
NFVNLQLLELNEDEMPKLVRTLHLIASSWLGYQSAMSHKTQITEEVIHQGMLQMISVVKPCATKAGREQLQLLEEGVRAM
HA

Sequences:

>Translated_242_residues
MKSVCRSDAFHILSPTVLYFGNPDRKTKRIMMKTKDRIVHAALELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQEI
VRDIFALYSAELIERFTPLQGQYESLSLLKHYLDSIFTLMWKYRFFYANLPEILQRDEELHADYIRVQERLQTNLIDIVR
NFVNLQLLELNEDEMPKLVRTLHLIASSWLGYQSAMSHKTQITEEVIHQGMLQMISVVKPCATKAGREQLQLLEEGVRAM
HA
>Mature_242_residues
MKSVCRSDAFHILSPTVLYFGNPDRKTKRIMMKTKDRIVHAALELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQEI
VRDIFALYSAELIERFTPLQGQYESLSLLKHYLDSIFTLMWKYRFFYANLPEILQRDEELHADYIRVQERLQTNLIDIVR
NFVNLQLLELNEDEMPKLVRTLHLIASSWLGYQSAMSHKTQITEEVIHQGMLQMISVVKPCATKAGREQLQLLEEGVRAM
HA

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28375; Mature: 28375

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVCRSDAFHILSPTVLYFGNPDRKTKRIMMKTKDRIVHAALELFNQQGERNITTNHIA
CCCCHHHCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
AHIEISPGNLYYHFRNKQEIVRDIFALYSAELIERFTPLQGQYESLSLLKHYLDSIFTLM
EEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
WKYRFFYANLPEILQRDEELHADYIRVQERLQTNLIDIVRNFVNLQLLELNEDEMPKLVR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH
TLHLIASSWLGYQSAMSHKTQITEEVIHQGMLQMISVVKPCATKAGREQLQLLEEGVRAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HA
CC
>Mature Secondary Structure
MKSVCRSDAFHILSPTVLYFGNPDRKTKRIMMKTKDRIVHAALELFNQQGERNITTNHIA
CCCCHHHCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
AHIEISPGNLYYHFRNKQEIVRDIFALYSAELIERFTPLQGQYESLSLLKHYLDSIFTLM
EEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
WKYRFFYANLPEILQRDEELHADYIRVQERLQTNLIDIVRNFVNLQLLELNEDEMPKLVR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH
TLHLIASSWLGYQSAMSHKTQITEEVIHQGMLQMISVVKPCATKAGREQLQLLEEGVRAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA