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The map label for this gene is yqhA [C]

Identifier: 227080429

GI number: 227080429

Start: 201989

End: 202477

Strand: Reverse

Name: yqhA [C]

Synonym: VCM66_0196

Alternate gene names: 227080429

Gene position: 202477-201989 (Counterclockwise)

Preceding gene: 227080430

Following gene: 227080425

Centisome position: 7.0

GC content: 43.35

Gene sequence:

>489_bases
ATGGAACGTTTGATCGAAAAACTTCTCTATTCTTCACGTTGGATTATGGCGCCGATTTATCTTGGCTTAAGCCTGCTGCT
GCTCGCGCTGGGCATTAAATTCTTCCAAGAAATTTTCCACCTACTGCCAAACATTTTTACTATCAAAGAAGTGGATCTGA
TCCTAGTCGCACTCTCTTTGATTGATGTGTCGCTGGTGGGCGGCCTTATCGTGATGGTGATGTTTTCCGGATATGAGAAC
TTCGTGTCTAAACTCGATGTCGATGAGAGTGAAGATAAACTCGGTTGGCTGGGCAAGCTTGATACCAGCTCGCTGAAAAA
CAAAGTATCTGCTTCGATTGTGGCCATCTCATCAATTCATCTGCTCAAAGTGTTTATGAACACCGAAAACATCGAAAGTG
ACAAAATCAAATGGTACTTGCTGCTGCACATTACTTTTGTGGTCTCGGCTTTTGCGATGGGCTACTTGGATAAAATCACC
AAGAAGTAG

Upstream 100 bases:

>100_bases
AGCAGATGAGAGAGCAGATCCAAAACATCGAATAACCCTTAAAGCCTCGTTGATTCGGGGCTTTTATTTAATCCCCTAAC
TTCTTAGTAATTGGAAACCT

Downstream 100 bases:

>100_bases
CGTCTTGAATCGTTGAAAAACTTCAATCGTTGAAAAGAAAGCGCCCTAGATTGGGCGCTTTTACTATCCCCCCGTCCGTT
AAGGGGATAACCTACAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MERLIEKLLYSSRWIMAPIYLGLSLLLLALGIKFFQEIFHLLPNIFTIKEVDLILVALSLIDVSLVGGLIVMVMFSGYEN
FVSKLDVDESEDKLGWLGKLDTSSLKNKVSASIVAISSIHLLKVFMNTENIESDKIKWYLLLHITFVVSAFAMGYLDKIT
KK

Sequences:

>Translated_162_residues
MERLIEKLLYSSRWIMAPIYLGLSLLLLALGIKFFQEIFHLLPNIFTIKEVDLILVALSLIDVSLVGGLIVMVMFSGYEN
FVSKLDVDESEDKLGWLGKLDTSSLKNKVSASIVAISSIHLLKVFMNTENIESDKIKWYLLLHITFVVSAFAMGYLDKIT
KK
>Mature_162_residues
MERLIEKLLYSSRWIMAPIYLGLSLLLLALGIKFFQEIFHLLPNIFTIKEVDLILVALSLIDVSLVGGLIVMVMFSGYEN
FVSKLDVDESEDKLGWLGKLDTSSLKNKVSASIVAISSIHLLKVFMNTENIESDKIKWYLLLHITFVVSAFAMGYLDKIT
KK

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=161, Percent_Identity=65.8385093167702, Blast_Score=224, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y196_VIBCM (C3LQH1)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002808980.1
- GeneID:   7771490
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_0196
- OMA:   VFSGYEN
- ProtClustDB:   PRK05208
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 18345; Mature: 18345

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x246fbce4)-; HASH(0x243f743c)-; HASH(0x2474ed6c)-; HASH(0x23c03694)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLIEKLLYSSRWIMAPIYLGLSLLLLALGIKFFQEIFHLLPNIFTIKEVDLILVALSL
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IDVSLVGGLIVMVMFSGYENFVSKLDVDESEDKLGWLGKLDTSSLKNKVSASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLKVFMNTENIESDKIKWYLLLHITFVVSAFAMGYLDKITKK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MERLIEKLLYSSRWIMAPIYLGLSLLLLALGIKFFQEIFHLLPNIFTIKEVDLILVALSL
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IDVSLVGGLIVMVMFSGYENFVSKLDVDESEDKLGWLGKLDTSSLKNKVSASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LLKVFMNTENIESDKIKWYLLLHITFVVSAFAMGYLDKITKK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA