| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is 226951055
Identifier: 226951055
GI number: 226951055
Start: 4113587
End: 4114513
Strand: Reverse
Name: 226951055
Synonym: CLM_4094
Alternate gene names: NA
Gene position: 4114513-4113587 (Counterclockwise)
Preceding gene: 226951056
Following gene: 226951054
Centisome position: 99.02
GC content: 35.06
Gene sequence:
>927_bases ATGAAGAAATCTATATTTTCTCATATGGTTGGAATAAAATATCCTATTATTCAAGGTGGAATGGCATGGATTGCTGATAG TTCACTAGCGGCGGCAGTTTCTAATGCAGGAGGTCTTGGAATAATAACAGGAAATGCTCCAGTAGAATGGGTTAGACAAG AAATAAGAAAGACAAAAGAATTAACAGATAAGCCCTTTGGAGTAAATATAATGCTTTTAGCAGAAACAGCAGATGAAATA GCCCAAATGGTTTGTAATGAGAGAGTAAAAGTAGTTACTACTGGAGCAGGTAATCCAGGAAAGTATATAAAAAAATGGAA AGAACATGGCATAATCGTAATACCTGTAGTTCCTTCTGTAGCTTTGGCTAAGAGAATGGAAAAATCAGGGGCAGATGCCA TAATAGCAGAAGGCTGTGAATCTGGTGGTCATGTAGGGGAATTGACAACAATGACATTGATACCACAGGTAGTTGATGCT GTAGATATACCTGTTATAGCAGCTGGAGGAATAGGTGATGGAAGAGGTATAGCAGCTAGTTTTATGTTAGGAGCAGATGC TGTTCAAGTAGGTACTAGATTTTTAGTAGCAAAAGAATGTACTGTTCATCAAAATTATAAAAATAAAGTTATGAAAGCTA AGGATATAGATACACAAGTTACAGGTAGACCTACAGGACATCCTGTTAGAATTATAAGAAATAAATTATCTAGAAAATTT CAAATATTAGAAAAGGAAGGTGCTCCTTTAGAGGAATTTGAAAACCTAGGAAGGGGAGCATTAAGTAAAGCTGTAAGAGA TGGAGATATTGATAATGGTTCTGTTATGGCAGGTCAAATCGCAGGACTTATAAATAAGGAACAAACTTGTAGTGAAATTA TAAATGAAATGTTTAATGAAGCCTATACACTATTAGGTTGTAAATAA
Upstream 100 bases:
>100_bases AAAATGGTCCACAAAATTAAATTTTAAAAACAAATTAATTATAGCACATAAACATTTAATAATAAACTATCGATTTAAGA TTCTAGGAGGAATTAAAACT
Downstream 100 bases:
>100_bases TATTTATTTTGGAGGATATTATGTCAAAGATAGCTTTTATATTCTCAGGTCAAGGATCTCAATATGTAGGTATGGGTAAG GAGCTATATGAAAATATTCC
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI AQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGCK
Sequences:
>Translated_308_residues MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI AQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGCK >Mature_308_residues MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI AQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGCK
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=175, Percent_Identity=29.1428571428571, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 32897; Mature: 32897
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKE CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH LTDKPFGVNIMLLAETADEIAQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSV HCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCEEEEECCCHH ALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDAVDIPVIAAGGIGDGRGIAAS HHHHHHHHCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH FMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF HHHCCHHHHHHHHHEEEHHHHHHCCHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE HHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHH AYTLLGCK HHHHHCCC >Mature Secondary Structure MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKE CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH LTDKPFGVNIMLLAETADEIAQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSV HCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCEEEEECCCHH ALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDAVDIPVIAAGGIGDGRGIAAS HHHHHHHHCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH FMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF HHHCCHHHHHHHHHEEEHHHHHHCCHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE HHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHH AYTLLGCK HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]