Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

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The map label for this gene is 226951055

Identifier: 226951055

GI number: 226951055

Start: 4113587

End: 4114513

Strand: Reverse

Name: 226951055

Synonym: CLM_4094

Alternate gene names: NA

Gene position: 4114513-4113587 (Counterclockwise)

Preceding gene: 226951056

Following gene: 226951054

Centisome position: 99.02

GC content: 35.06

Gene sequence:

>927_bases
ATGAAGAAATCTATATTTTCTCATATGGTTGGAATAAAATATCCTATTATTCAAGGTGGAATGGCATGGATTGCTGATAG
TTCACTAGCGGCGGCAGTTTCTAATGCAGGAGGTCTTGGAATAATAACAGGAAATGCTCCAGTAGAATGGGTTAGACAAG
AAATAAGAAAGACAAAAGAATTAACAGATAAGCCCTTTGGAGTAAATATAATGCTTTTAGCAGAAACAGCAGATGAAATA
GCCCAAATGGTTTGTAATGAGAGAGTAAAAGTAGTTACTACTGGAGCAGGTAATCCAGGAAAGTATATAAAAAAATGGAA
AGAACATGGCATAATCGTAATACCTGTAGTTCCTTCTGTAGCTTTGGCTAAGAGAATGGAAAAATCAGGGGCAGATGCCA
TAATAGCAGAAGGCTGTGAATCTGGTGGTCATGTAGGGGAATTGACAACAATGACATTGATACCACAGGTAGTTGATGCT
GTAGATATACCTGTTATAGCAGCTGGAGGAATAGGTGATGGAAGAGGTATAGCAGCTAGTTTTATGTTAGGAGCAGATGC
TGTTCAAGTAGGTACTAGATTTTTAGTAGCAAAAGAATGTACTGTTCATCAAAATTATAAAAATAAAGTTATGAAAGCTA
AGGATATAGATACACAAGTTACAGGTAGACCTACAGGACATCCTGTTAGAATTATAAGAAATAAATTATCTAGAAAATTT
CAAATATTAGAAAAGGAAGGTGCTCCTTTAGAGGAATTTGAAAACCTAGGAAGGGGAGCATTAAGTAAAGCTGTAAGAGA
TGGAGATATTGATAATGGTTCTGTTATGGCAGGTCAAATCGCAGGACTTATAAATAAGGAACAAACTTGTAGTGAAATTA
TAAATGAAATGTTTAATGAAGCCTATACACTATTAGGTTGTAAATAA

Upstream 100 bases:

>100_bases
AAAATGGTCCACAAAATTAAATTTTAAAAACAAATTAATTATAGCACATAAACATTTAATAATAAACTATCGATTTAAGA
TTCTAGGAGGAATTAAAACT

Downstream 100 bases:

>100_bases
TATTTATTTTGGAGGATATTATGTCAAAGATAGCTTTTATATTCTCAGGTCAAGGATCTCAATATGTAGGTATGGGTAAG
GAGCTATATGAAAATATTCC

Product: 2-nitropropane dioxygenase family oxidoreductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI
AQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA
VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF
QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGCK

Sequences:

>Translated_308_residues
MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI
AQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA
VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF
QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGCK
>Mature_308_residues
MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI
AQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA
VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF
QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNEAYTLLGCK

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=175, Percent_Identity=29.1428571428571, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 32897; Mature: 32897

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKE
CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LTDKPFGVNIMLLAETADEIAQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSV
HCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCEEEEECCCHH
ALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDAVDIPVIAAGGIGDGRGIAAS
HHHHHHHHCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH
FMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF
HHHCCHHHHHHHHHEEEHHHHHHCCHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH
QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE
HHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHH
AYTLLGCK
HHHHHCCC
>Mature Secondary Structure
MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKE
CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LTDKPFGVNIMLLAETADEIAQMVCNERVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSV
HCCCCCCEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCEEEEECCCHH
ALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDAVDIPVIAAGGIGDGRGIAAS
HHHHHHHHCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH
FMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNKLSRKF
HHHCCHHHHHHHHHEEEHHHHHHCCHHHHHHECCCCCCEECCCCCCCHHHHHHHHHHHHH
QILEKEGAPLEEFENLGRGALSKAVRDGDIDNGSVMAGQIAGLINKEQTCSEIINEMFNE
HHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHH
AYTLLGCK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]