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The map label for this gene is accB [H]

Identifier: 226951051

GI number: 226951051

Start: 4110120

End: 4110596

Strand: Reverse

Name: accB [H]

Synonym: CLM_4090

Alternate gene names: 226951051

Gene position: 4110596-4110120 (Counterclockwise)

Preceding gene: 226951052

Following gene: 226951050

Centisome position: 98.92

GC content: 26.83

Gene sequence:

>477_bases
ATGGATTTTAAAGGCATAGAAAATTTAATAAAAGCTATGAGTGAATCAAATTTATCTTCTATGGATATAGAGTATAATGG
TATAGCTATAAAAATGAAAAAAGAAAACAATAAAATTTATAAACAGGAAATTATATCTCAGGAATATGAAAAAGAAAATA
GAGATAATATTGTAGAAGAAAAAAAATTAGATTTATTAAGTAATGAAGAAAAAACAGGTATAGCTATTGCAGATAATTTT
ATAGAAATAGTATCACCTATAGTAGGAACTTTTTATGAATCACCAGGAGTAGATAAAAAACCTTATGCTAAGGCAGGAGA
TAAGGTTAAAAAAGGAGATACAGTTTGCATAGTGGAAGCTATGAAGGTTATGAATGAAATTGAAGCTGAAGTAGATGGAG
AAATAGTAGAGGTATTAGTAGAGAATGAGCAAATGGTTCAATATGGAGAAGTTTTATTTAAGATAAAGCCACTATAA

Upstream 100 bases:

>100_bases
AGGCGGAAGAAATAAAATAATAAATTATGCTATGTCTAATTCTTTAGGTTTTGGAGGACATAATGCAGTAATATTATTAA
AAAAATGGGGTGAGTAATAA

Downstream 100 bases:

>100_bases
TGAAAAAGGAGAATTTTTAATGGAGAAATTTTTAGATATAAATGAAATAAAAAAAATTATTCCGCACAGATATCCATTTT
TATTAGTAGATAAAATAACT

Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein

Products: Malonyl-CoA; malonyl-CoA; phosphate; ADP [C]

Alternate protein names: BCCP [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDFKGIENLIKAMSESNLSSMDIEYNGIAIKMKKENNKIYKQEIISQEYEKENRDNIVEEKKLDLLSNEEKTGIAIADNF
IEIVSPIVGTFYESPGVDKKPYAKAGDKVKKGDTVCIVEAMKVMNEIEAEVDGEIVEVLVENEQMVQYGEVLFKIKPL

Sequences:

>Translated_158_residues
MDFKGIENLIKAMSESNLSSMDIEYNGIAIKMKKENNKIYKQEIISQEYEKENRDNIVEEKKLDLLSNEEKTGIAIADNF
IEIVSPIVGTFYESPGVDKKPYAKAGDKVKKGDTVCIVEAMKVMNEIEAEVDGEIVEVLVENEQMVQYGEVLFKIKPL
>Mature_158_residues
MDFKGIENLIKAMSESNLSSMDIEYNGIAIKMKKENNKIYKQEIISQEYEKENRDNIVEEKKLDLLSNEEKTGIAIADNF
IEIVSPIVGTFYESPGVDKKPYAKAGDKVKKGDTVCIVEAMKVMNEIEAEVDGEIVEVLVENEQMVQYGEVLFKIKPL

Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789653, Length=159, Percent_Identity=32.0754716981132, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001249
- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: NA

Molecular weight: Translated: 17901; Mature: 17901

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKGIENLIKAMSESNLSSMDIEYNGIAIKMKKENNKIYKQEIISQEYEKENRDNIVEE
CCHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
KKLDLLSNEEKTGIAIADNFIEIVSPIVGTFYESPGVDKKPYAKAGDKVKKGDTVCIVEA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
MKVMNEIEAEVDGEIVEVLVENEQMVQYGEVLFKIKPL
HHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHEECCC
>Mature Secondary Structure
MDFKGIENLIKAMSESNLSSMDIEYNGIAIKMKKENNKIYKQEIISQEYEKENRDNIVEE
CCHHHHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
KKLDLLSNEEKTGIAIADNFIEIVSPIVGTFYESPGVDKKPYAKAGDKVKKGDTVCIVEA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
MKVMNEIEAEVDGEIVEVLVENEQMVQYGEVLFKIKPL
HHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; HCO3-; Proton; acetyl-CoA; ATP [C]

Specific reaction: acetyl-CoA = malonyl-CoA HCO3- + Proton + acetyl-CoA + ATP = malonyl-CoA + phosphate + ADP [C]

General reaction: Ligases; Forming Carbon-Carbon Bonds; acetyl-CoA carboxylase Reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592499; 8969508; 9384377 [H]