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The map label for this gene is 226950882

Identifier: 226950882

GI number: 226950882

Start: 3938227

End: 3939507

Strand: Reverse

Name: 226950882

Synonym: CLM_3896

Alternate gene names: NA

Gene position: 3939507-3938227 (Counterclockwise)

Preceding gene: 226950883

Following gene: 226950881

Centisome position: 94.81

GC content: 25.76

Gene sequence:

>1281_bases
ATGGGCAAAAAAAGTAAAACAAAAAATATAATAGTCAAAATTTGTTGTATAATAGCTTCTTTTGCTTTGTGGTTATATAT
ATTTAACATAGAAAATCCAATAAAAGAGCAAAAAATAACGGTTCCCGTTAACATAGTAAATAAGGAAAGCATGAATGAAA
TGGAATTAGCTTTAGTGCCAAAAGAGGCTAGTACTGTTACATTGATAATAAAAGGTAATGTAAAGGATATTTATTCTGTA
AAAGCAGAAGATTTTAAAGTAGAGGCAGACTTAAATTCTTTTGGCTTAAAAAAAGGCGAAAATAAAATACCTGTTAAAAT
CAAGAAAAGCCCTAGTAACATTAAAATAGTAAATGAAGAAAATTTATGGACTAAAATTACTTTGGATAAGCTAAAGTCTA
AGACAGTACCAGTTAAAATAAAAGTAACAGGTACTCCTAAAGAAGGATATGCAGCTTTAGATCCAATTTTAAAAGAAGAA
ACGGCTACCATTTATGGTACAGAAACTTATATTAACAAAGTAAAAGAAGTAGTAGGAAATTGTAACATAGAAGGTAAATC
TTCAGAGATAAAAACTAATATATCTCTTCAGCCCAAAACATATGATGGAGATATAATAAATGAGATTTCAGTAGAGCCAT
CCAAAGTATATGTAGAGATACATTTAAGAAGAATTAAAAAAGTACCGATAAATATGAAACTTAGTGAAGACATATCAAAC
AATAAAAATATAGAATCTATAACATCATTACAAAATGAAGTTGAGATTTCTGGTGAAGAAGGGGCTCTACAAAATATAAA
ATATATAAATACAGAAACTATAAATGTTAACTCTATAAAAATAGGGCAGGAAAATATAGAAAGTAATTTGGTATTACCAA
AAGGAGTTATATTAGTAAACGGTAATAATACTGTAAAATTTAAAGTTAAATTTAAAGTTATAGAAGACAAAAAGGAAGAG
GAAAAAAATAAAGATAAAGAGGAAAATAAAGAAGATAAAATAATTGAGAAGAAAGTTACAAAAGATATTAATATTATAAA
TGAACCTAAAGATAAAGAAGTTTCATTAAGTGAGCCTAGTGTAACTATAAATATGAAAGGCAATAAAGATGTTATAGACA
AGATAAATGTGAATAATATAAATTGTTATGTGGATTTAAAAAATGTTAATTTAGGAGAAAATGTAGTAAAAGTTATTGTA
GATATGGGAGATAATAAAATAGATTATAGTTCTAATTTAGACAGTATAAAAGTAACAATAAAGGAAAAACAGGAGGAATA
G

Upstream 100 bases:

>100_bases
TAACAAGAGGATATGATAAAGAAAAATTAAAGGACATTATGATAAAAATAATAAAAAAAGGTTTTGATGAAGACAGTACT
TTTAGGGGGCAGGTGGTAGA

Downstream 100 bases:

>100_bases
CATGTCATTGAAAATTAATAATTTGACTTTAGAAATAGATGAAGACTTAAATTTATTAAAGGATAAAGTTTGTAAAAAAT
TAAATATATCTTCACATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: YbbR-Like Protein; YbbR-Like; Membrane Associated Protein; Ybbr Family Protein; Secreted Protein

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MGKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVPKEASTVTLIIKGNVKDIYSV
KAEDFKVEADLNSFGLKKGENKIPVKIKKSPSNIKIVNEENLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALDPILKEE
TATIYGTETYINKVKEVVGNCNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPINMKLSEDISN
NKNIESITSLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVNGNNTVKFKVKFKVIEDKKEE
EKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPSVTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIV
DMGDNKIDYSSNLDSIKVTIKEKQEE

Sequences:

>Translated_426_residues
MGKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVPKEASTVTLIIKGNVKDIYSV
KAEDFKVEADLNSFGLKKGENKIPVKIKKSPSNIKIVNEENLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALDPILKEE
TATIYGTETYINKVKEVVGNCNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPINMKLSEDISN
NKNIESITSLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVNGNNTVKFKVKFKVIEDKKEE
EKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPSVTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIV
DMGDNKIDYSSNLDSIKVTIKEKQEE
>Mature_425_residues
GKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVPKEASTVTLIIKGNVKDIYSVK
AEDFKVEADLNSFGLKKGENKIPVKIKKSPSNIKIVNEENLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALDPILKEET
ATIYGTETYINKVKEVVGNCNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPINMKLSEDISNN
KNIESITSLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVNGNNTVKFKVKFKVIEDKKEEE
KNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPSVTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIVD
MGDNKIDYSSNLDSIKVTIKEKQEE

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47934; Mature: 47803

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVP
CCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
KEASTVTLIIKGNVKDIYSVKAEDFKVEADLNSFGLKKGENKIPVKIKKSPSNIKIVNEE
CCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEECC
NLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALDPILKEETATIYGTETYINKVKEVVGN
CCEEEEEHHHHCCCCCEEEEEEECCCCCCCHHHCHHHHCCCEEEEECHHHHHHHHHHHHC
CNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPINMKLSEDISN
CCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEEHHCCCCCEEECCCCCC
NKNIESITSLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVN
CCCHHHHHHCCCCEEECCCCCCCCCEEEECCEEEEEEEEEECHHCCCCCEEECCCEEEEC
GNNTVKFKVKFKVIEDKKEEEKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPS
CCCEEEEEEEEEEECCCHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
VTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIVDMGDNKIDYSSNLDSIKVTI
EEEEECCCCCCEEEECCCEEEEEEEEECCCCCHHHHHEEEECCCCEEECCCCCCEEEEEE
KEKQEE
EECCCC
>Mature Secondary Structure 
GKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVP
CCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
KEASTVTLIIKGNVKDIYSVKAEDFKVEADLNSFGLKKGENKIPVKIKKSPSNIKIVNEE
CCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEECC
NLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALDPILKEETATIYGTETYINKVKEVVGN
CCEEEEEHHHHCCCCCEEEEEEECCCCCCCHHHCHHHHCCCEEEEECHHHHHHHHHHHHC
CNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPINMKLSEDISN
CCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEEHHCCCCCEEECCCCCC
NKNIESITSLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVN
CCCHHHHHHCCCCEEECCCCCCCCCEEEECCEEEEEEEEEECHHCCCCCEEECCCEEEEC
GNNTVKFKVKFKVIEDKKEEEKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPS
CCCEEEEEEEEEEECCCHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
VTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIVDMGDNKIDYSSNLDSIKVTI
EEEEECCCCCCEEEECCCEEEEEEEEECCCCCHHHHHEEEECCCCEEECCCCCCEEEEEE
KEKQEE
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA