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The map label for this gene is 226950881

Identifier: 226950881

GI number: 226950881

Start: 3936627

End: 3938225

Strand: Reverse

Name: 226950881

Synonym: CLM_3895

Alternate gene names: NA

Gene position: 3938225-3936627 (Counterclockwise)

Preceding gene: 226950882

Following gene: 226950880

Centisome position: 94.78

GC content: 30.39

Gene sequence:

>1599_bases
ATGTCATTGAAAATTAATAATTTGACTTTAGAAATAGATGAAGACTTAAATTTATTAAAGGATAAAGTTTGTAAAAAATT
AAATATATCTTCACATTATATAAAGGATTTAAAAATATTAAGAGAATCTATAGATGCTAGAAGAAATTCTATAAAATTTA
ATTATTCTGTTGAAGTATCTTGTGAAGATGAGAAAAGATTAATTAAGAATTTAAAAGATAAAAATATAACTTTTCAAGAT
GATGAATATGAAGAAAAAATAGTATTGGGAACTAAAGATATGAAAGAAAGGCCAGTTATAGTAGGTATGGGACCGGCAGG
CATGTTTGCTGGCCTTATGCTAGCTAAAAATGGATACAGGCCTATAATTATAGAAAGAGGAGAAGCTATAGAAGAAAGAA
GTAAAACCGTAGAGAAATTTTGGAACACAGGGGCTCTAAATATAGAATCTAATGTACAATTTGGAGAAGGGGGAGCGGGT
ACTTTTTCTGATGGAAAGTTGACTACAAGAATAAAGGATAAAAGGTGTTCTTTTATATTAGAAGAAATGGTTAAAGCAGG
AGCGCCCAAGGAGATAATATATTCTGGCAAGCCTCATATTGGAACAGATATATTAAAAAATGTAGTTAAAAATATAAGGA
ATACTATAAATTCTCTAGGAGGAGAAATAAGATTTAATAGTAAATTAGAAAACGTAATAATTAAAGATGGAAAGGTAAAT
GCTATTATAGTAAATAAAGAAGAGATTCCTTGTGAAAATTTAATATTAGCTATAGGACATAGTTCTAGGGATACTTATGA
AATGCTTTATAAAAATAATATTTTTATGGAAAGTAAGGCCTTTGCCATAGGAGTTAGAGTAGAGCATTTAAAAGAAATGA
TAGATAAAAATCAATATGGGAAATATGCAGGGCATTCTAGACTTAAAGCTGCAGATTATAGATTAACTTACAAAACTAAA
AATAGTAATAGAGCAGTGTATAGTTTTTGCATGTGCCCTGGTGGAGAGGTAGTTGCGGCAGCTTCTGAAGAAGGTTTGTT
AGTTACTAATGGTATGAGTTATTATTCAAGAAATAAGGATAATTCAAATTCAGCTATAGTTGTATCTGTAACACCTGAAG
ACTTTGAAGGGAACACACCTTTAAAGGGAATGGAGTTCCAAAGATACTATGAAAGACTAGCTTATAAATTGGGTGGAGAA
AATTATAATGCTCCAGTACAGTTGATAGAAGATTTTTTAAAGGATAAAAATTCATCTAAATTAGGAGCAGTAAAACCGTC
CTACAAACCAGGATATGAATTTAAAGATATATCGAAATGTTTACCTAATTATGTGATAGACTCATTAAAAGAAGGTTTTT
CTAGCTTTGATAATAGAATAAAAGGATTTGCTAGCAATGGTGCTATTTTAACGGGAATAGAAACTAGAACATCAGCTCCA
GTAAGATTAACTAGAAATGAAAACTTAGAAAGTATATCTTTGAAGGGACTATATCCAGCGGGAGAAGGTGCTGGATATGC
GGGAGGTATAATTTCTGCAGCGGTGGATGGAGTAAAGGTTGCTGAAAATATAATAAAAACATATAGTTCGTTAAAATAA

Upstream 100 bases:

>100_bases
GTAGTAAAAGTTATTGTAGATATGGGAGATAATAAAATAGATTATAGTTCTAATTTAGACAGTATAAAAGTAACAATAAA
GGAAAAACAGGAGGAATAGC

Downstream 100 bases:

>100_bases
AAACTTTCAAAAAAAATATTGCGTTGTTCATGAATTTTGATAAAATATAAGTTAAAGAATAGTATAAGCTAAAGAATAAT
ATAAATATGGGAGATTTAAA

Product: FAD-binding oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MSLKINNLTLEIDEDLNLLKDKVCKKLNISSHYIKDLKILRESIDARRNSIKFNYSVEVSCEDEKRLIKNLKDKNITFQD
DEYEEKIVLGTKDMKERPVIVGMGPAGMFAGLMLAKNGYRPIIIERGEAIEERSKTVEKFWNTGALNIESNVQFGEGGAG
TFSDGKLTTRIKDKRCSFILEEMVKAGAPKEIIYSGKPHIGTDILKNVVKNIRNTINSLGGEIRFNSKLENVIIKDGKVN
AIIVNKEEIPCENLILAIGHSSRDTYEMLYKNNIFMESKAFAIGVRVEHLKEMIDKNQYGKYAGHSRLKAADYRLTYKTK
NSNRAVYSFCMCPGGEVVAAASEEGLLVTNGMSYYSRNKDNSNSAIVVSVTPEDFEGNTPLKGMEFQRYYERLAYKLGGE
NYNAPVQLIEDFLKDKNSSKLGAVKPSYKPGYEFKDISKCLPNYVIDSLKEGFSSFDNRIKGFASNGAILTGIETRTSAP
VRLTRNENLESISLKGLYPAGEGAGYAGGIISAAVDGVKVAENIIKTYSSLK

Sequences:

>Translated_532_residues
MSLKINNLTLEIDEDLNLLKDKVCKKLNISSHYIKDLKILRESIDARRNSIKFNYSVEVSCEDEKRLIKNLKDKNITFQD
DEYEEKIVLGTKDMKERPVIVGMGPAGMFAGLMLAKNGYRPIIIERGEAIEERSKTVEKFWNTGALNIESNVQFGEGGAG
TFSDGKLTTRIKDKRCSFILEEMVKAGAPKEIIYSGKPHIGTDILKNVVKNIRNTINSLGGEIRFNSKLENVIIKDGKVN
AIIVNKEEIPCENLILAIGHSSRDTYEMLYKNNIFMESKAFAIGVRVEHLKEMIDKNQYGKYAGHSRLKAADYRLTYKTK
NSNRAVYSFCMCPGGEVVAAASEEGLLVTNGMSYYSRNKDNSNSAIVVSVTPEDFEGNTPLKGMEFQRYYERLAYKLGGE
NYNAPVQLIEDFLKDKNSSKLGAVKPSYKPGYEFKDISKCLPNYVIDSLKEGFSSFDNRIKGFASNGAILTGIETRTSAP
VRLTRNENLESISLKGLYPAGEGAGYAGGIISAAVDGVKVAENIIKTYSSLK
>Mature_531_residues
SLKINNLTLEIDEDLNLLKDKVCKKLNISSHYIKDLKILRESIDARRNSIKFNYSVEVSCEDEKRLIKNLKDKNITFQDD
EYEEKIVLGTKDMKERPVIVGMGPAGMFAGLMLAKNGYRPIIIERGEAIEERSKTVEKFWNTGALNIESNVQFGEGGAGT
FSDGKLTTRIKDKRCSFILEEMVKAGAPKEIIYSGKPHIGTDILKNVVKNIRNTINSLGGEIRFNSKLENVIIKDGKVNA
IIVNKEEIPCENLILAIGHSSRDTYEMLYKNNIFMESKAFAIGVRVEHLKEMIDKNQYGKYAGHSRLKAADYRLTYKTKN
SNRAVYSFCMCPGGEVVAAASEEGLLVTNGMSYYSRNKDNSNSAIVVSVTPEDFEGNTPLKGMEFQRYYERLAYKLGGEN
YNAPVQLIEDFLKDKNSSKLGAVKPSYKPGYEFKDISKCLPNYVIDSLKEGFSSFDNRIKGFASNGAILTGIETRTSAPV
RLTRNENLESISLKGLYPAGEGAGYAGGIISAAVDGVKVAENIIKTYSSLK

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 59279; Mature: 59147

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKINNLTLEIDEDLNLLKDKVCKKLNISSHYIKDLKILRESIDARRNSIKFNYSVEVS
CCEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEE
CEDEKRLIKNLKDKNITFQDDEYEEKIVLGTKDMKERPVIVGMGPAGMFAGLMLAKNGYR
CCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHCCCCC
PIIIERGEAIEERSKTVEKFWNTGALNIESNVQFGEGGAGTFSDGKLTTRIKDKRCSFIL
EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCEEEEEECHHHHHHHH
EEMVKAGAPKEIIYSGKPHIGTDILKNVVKNIRNTINSLGGEIRFNSKLENVIIKDGKVN
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEE
AIIVNKEEIPCENLILAIGHSSRDTYEMLYKNNIFMESKAFAIGVRVEHLKEMIDKNQYG
EEEEECCCCCCCCEEEEECCCCCCHHHHHHHCCEEEECCEEEEEEEHHHHHHHHCCCCCC
KYAGHSRLKAADYRLTYKTKNSNRAVYSFCMCPGGEVVAAASEEGLLVTNGMSYYSRNKD
CCCCCCCCEEECEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCEEEECCCHHHHCCCC
NSNSAIVVSVTPEDFEGNTPLKGMEFQRYYERLAYKLGGENYNAPVQLIEDFLKDKNSSK
CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
LGAVKPSYKPGYEFKDISKCLPNYVIDSLKEGFSSFDNRIKGFASNGAILTGIETRTSAP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
VRLTRNENLESISLKGLYPAGEGAGYAGGIISAAVDGVKVAENIIKTYSSLK
EEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLKINNLTLEIDEDLNLLKDKVCKKLNISSHYIKDLKILRESIDARRNSIKFNYSVEVS
CEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEE
CEDEKRLIKNLKDKNITFQDDEYEEKIVLGTKDMKERPVIVGMGPAGMFAGLMLAKNGYR
CCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHHHHHHHCCCCC
PIIIERGEAIEERSKTVEKFWNTGALNIESNVQFGEGGAGTFSDGKLTTRIKDKRCSFIL
EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCEEEEEECHHHHHHHH
EEMVKAGAPKEIIYSGKPHIGTDILKNVVKNIRNTINSLGGEIRFNSKLENVIIKDGKVN
HHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCEE
AIIVNKEEIPCENLILAIGHSSRDTYEMLYKNNIFMESKAFAIGVRVEHLKEMIDKNQYG
EEEEECCCCCCCCEEEEECCCCCCHHHHHHHCCEEEECCEEEEEEEHHHHHHHHCCCCCC
KYAGHSRLKAADYRLTYKTKNSNRAVYSFCMCPGGEVVAAASEEGLLVTNGMSYYSRNKD
CCCCCCCCEEECEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCEEEECCCHHHHCCCC
NSNSAIVVSVTPEDFEGNTPLKGMEFQRYYERLAYKLGGENYNAPVQLIEDFLKDKNSSK
CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
LGAVKPSYKPGYEFKDISKCLPNYVIDSLKEGFSSFDNRIKGFASNGAILTGIETRTSAP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
VRLTRNENLESISLKGLYPAGEGAGYAGGIISAAVDGVKVAENIIKTYSSLK
EEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]