Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

Click here to switch to the map view.

The map label for this gene is yaiI [C]

Identifier: 226950703

GI number: 226950703

Start: 3725483

End: 3725917

Strand: Reverse

Name: yaiI [C]

Synonym: CLM_3711

Alternate gene names: 226950703

Gene position: 3725917-3725483 (Counterclockwise)

Preceding gene: 226950704

Following gene: 226950701

Centisome position: 89.67

GC content: 26.44

Gene sequence:

>435_bases
ATGAGAATATTAATAGATGCAGATGCTTGCCCAGGAAGAAATATAATAGAACAAGTAGCTAAAAAATATAAAATAGATGT
TATGATGTTTTGTGATATAAACCATGTTATAAATAGTAATTATAGTATTATTAAATATGTAGATCATGGATTTCAAAGTG
TAGATATGGCTCTAATAAATGAAACTAGAGAAAATGATATAATAATAACCCAAGATTTTGGAGTGGCTGCCATGGCTCTT
GGGAAAAAAGCTAAATCTATAAATCCTAAAGGGTATATATTTAGTAATAACAATATAGATAGAATGTTATTTGAAAGACA
TATAAGTGCAAAAATGAGAAGAGCAGGCATAAAAAATACTTCCACTCATAAAAAAAGAGGTTCAGAAGATGATACTAGAT
TAGAGAAAAATCTTATAAAACTAATAATTGAATAA

Upstream 100 bases:

>100_bases
GTAGAAGCATATAAAAAGAATATGTTTGCTCTTTTAGGAAAACCAGGCTATGAAGATATGAAAGCTACATTAGAAGAAAG
ATTGAAGTAATAGAATTTTT

Downstream 100 bases:

>100_bases
AAAATATATAAATATATCATTATAAATTATTTATATAAGATTTTAATTAAAGAAGAGGATGTCTCAAAATAGCCTTAATT
TTGAGACATCCTATTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRILIDADACPGRNIIEQVAKKYKIDVMMFCDINHVINSNYSIIKYVDHGFQSVDMALINETRENDIIITQDFGVAAMAL
GKKAKSINPKGYIFSNNNIDRMLFERHISAKMRRAGIKNTSTHKKRGSEDDTRLEKNLIKLIIE

Sequences:

>Translated_144_residues
MRILIDADACPGRNIIEQVAKKYKIDVMMFCDINHVINSNYSIIKYVDHGFQSVDMALINETRENDIIITQDFGVAAMAL
GKKAKSINPKGYIFSNNNIDRMLFERHISAKMRRAGIKNTSTHKKRGSEDDTRLEKNLIKLIIE
>Mature_144_residues
MRILIDADACPGRNIIEQVAKKYKIDVMMFCDINHVINSNYSIIKYVDHGFQSVDMALINETRENDIIITQDFGVAAMAL
GKKAKSINPKGYIFSNNNIDRMLFERHISAKMRRAGIKNTSTHKKRGSEDDTRLEKNLIKLIIE

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003791 [H]

Pfam domain/function: PF02639 DUF188 [H]

EC number: NA

Molecular weight: Translated: 16473; Mature: 16473

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIDADACPGRNIIEQVAKKYKIDVMMFCDINHVINSNYSIIKYVDHGFQSVDMALIN
CEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEEECCCCHHHHHHHHC
ETRENDIIITQDFGVAAMALGKKAKSINPKGYIFSNNNIDRMLFERHISAKMRRAGIKNT
CCCCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
STHKKRGSEDDTRLEKNLIKLIIE
CCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRILIDADACPGRNIIEQVAKKYKIDVMMFCDINHVINSNYSIIKYVDHGFQSVDMALIN
CEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEEECCCCHHHHHHHHC
ETRENDIIITQDFGVAAMALGKKAKSINPKGYIFSNNNIDRMLFERHISAKMRRAGIKNT
CCCCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
STHKKRGSEDDTRLEKNLIKLIIE
CCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA