Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

Click here to switch to the map view.

The map label for this gene is 226950701

Identifier: 226950701

GI number: 226950701

Start: 3723015

End: 3725018

Strand: Reverse

Name: 226950701

Synonym: CLM_3709

Alternate gene names: NA

Gene position: 3725018-3723015 (Counterclockwise)

Preceding gene: 226950703

Following gene: 226950700

Centisome position: 89.65

GC content: 25.85

Gene sequence:

>2004_bases
ATGGAAGAGCTAAATATTATTTTTGATAAGGAAAGTCCTCAGGAAAAAAATTCTAGCATAAGAATTAAAGCTTTTATAGA
AAACAATAAAAAAATTTTATATAAATTTATAATAGGCAAAGAAGGTACGTGGAATACTGTTAATGATTTTGGTTTTAATG
ATACTATAAACTGGATACCTGAAGAAGAGGGCGAATATATAATAATGGTACAAGCTAAAAGAGAAGATAGTACTAAACCC
TTTGATTTTATTAGCAAATTTGATTATGTGATAGGAGAAGCAGAGGAAAACTTTATAAGAAATGTCTATCTAAATAAAGA
TACTCTCAATATGGGAGAAAGAATAGAAGCAGTGGTGGAAAGCAATAAATTTCCATTAATGTTTAAATATTGGCTTAAGG
AAGATGATAATTGGAAGCTTATAAAGGATTATTCTACAGAAAATAGCATATCCCTTGTAGTAAAAAAACCAGGCATACAA
GAACTTATGGTTGAATGTAAAGATTTAAAATCTGTTAAAGATTATGATGATTCTTTCAAAGTAGCTTTTAAAGTTAATTC
TATAGACAATGTAGAAATAGTTGATTTTAATTGCTTAACTAAAGAATTAATATGTGATGAAGACTTAGTTTTTAAAGTAG
AATCAGTTTATGAAGAAGGTAGAGATATACTATATAAATTTATAAAAATAGATAGTAATGGGACACAACAATGTATACAG
GATTATTCTAGTAATAATGTAGTATCTTATATAGAAAAAGATAGTGGAGATTATAAATTGTTATGTTTAGTTAAGGATAT
GTATTCTCAAAATGAATTTGATGATAGGGCTATGTTAAAATTTACGGTTAAAGCTTATCGAGATATTGTTATAAGAAAAT
TTACAACTAATTTAAATTCACCTCAAATGACGGATACTGCTATAGAGTTGAAAATAAATGCAGAAGGTGGTAAGGAACTT
TTATATAAGTTTATAATAAAGGGTAAGCACATGGAGGATTCTGGATACATAAGAAATAATATATATACATGGACACCTTC
TATTCCAGGTAAATATTCTATAGAGGCCTGGGTAAAAGATTCTTCCAGTGAAAATGAATTTGATGATAAGTCTTCTATAG
AATATACAATAAATTTAGAATATATTAAGGAACCTATAAAAATTGAAAAAGTAATATTAGATAAAGGAAAACATGTTTTA
AAAGGAGAAGAAGTAGAAATAAGAGCTATAAGTAATGGAGGGAATAATGTAAGATATGCATTTTCTATAAAAAAAGATGG
AAAAGAAGAAGAAAAAATAGATTTTGGTACTTGTAATTGGGCTAAATTTATACCAAAAGAAACAGGTACATATGAATTAG
AGGTTTTAGCCAAACATAAATATTCATCTAGAGAATATGATTCTCATTATATAGCTTATATAAACAGTCATAATTATATA
CCAGCTATAATTGATTATGTTATATGTCCAGTAAAGACTAGTTATATAGTAGGAGATGAGATATTATTAAAGGTTATTAT
TCAAAATACAAAGGATAATTTAATAAAATATATTTTAAGAATAAATAATGAAAAAGTAGAAGAAACAGATTATATTGAAA
ATAAAGATTTTAAATATATACCTAAATGTAGTGGGGCTTATACTATAGAAGTATTAGCTAAAAATAAAGAAAGCGAAGAA
ATTTATGATTCTAAAAAAGAAGTTAAATTTTATGTAAGGGAAGCATTACCTATAACAAACACAAAAATAAAAACTAGCAG
GACAGATATAAAATGTAATGAAACTGTAACTTTTAGCGTAGATAGTGAGGGAGGAAATGCAGTTCTTTATCAATTTTATA
TTATGAATAAAGGAGAATGGAAGTTAGTCCAAGATTATAGCAGAAAGAAATATTATACCTTTATGCCTTTTAATGAAGGG
GAATATGAAGTATTAGTTTTATCCAAAAGTAGCTTTTTAAAGTGTGCTTATGAAGATTATGATATATTTAAATTTAAAGT
GTAA

Upstream 100 bases:

>100_bases
AAGGTGATATAATAATATAAATAGAATAAAATACTATTACAAAATTTGGTATTATAGTATAATGTATTTGTTAATGTTTT
TAAGAGAGGATGATGTAATA

Downstream 100 bases:

>100_bases
ATAAAGTAGAAAGATGAACGATAATGTTAAATATATGTTTAATATTGGTGGTGGATTTATGAAAGTGAACAGTAGTGAAA
TGGTATTACAACAGATGCTA

Product: triple tyrosine motif-containing protein

Products: NA

Alternate protein names: Triple Tyrosine Motif-Containing Protein; Two Component Regulator Three Y Motif Protein; Two Component Regulator Three Y Domain-Containing Protein; SpoIID-Like Domain-Containing Protein; SpoIID/LytB Domain-Containing Protein; SpoIID/LytB Domain Protein; Beta-N-Acetylglucosaminidase

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFNDTINWIPEEEGEYIIMVQAKREDSTKP
FDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVESNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQ
ELMVECKDLKSVKDYDDSFKVAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNSPQMTDTAIELKINAEGGKEL
LYKFIIKGKHMEDSGYIRNNIYTWTPSIPGKYSIEAWVKDSSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVL
KGEEVEIRAISNGGNNVRYAFSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYIPKCSGAYTIEVLAKNKESEE
IYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSVDSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEG
EYEVLVLSKSSFLKCAYEDYDIFKFKV

Sequences:

>Translated_667_residues
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFNDTINWIPEEEGEYIIMVQAKREDSTKP
FDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVESNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQ
ELMVECKDLKSVKDYDDSFKVAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNSPQMTDTAIELKINAEGGKEL
LYKFIIKGKHMEDSGYIRNNIYTWTPSIPGKYSIEAWVKDSSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVL
KGEEVEIRAISNGGNNVRYAFSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYIPKCSGAYTIEVLAKNKESEE
IYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSVDSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEG
EYEVLVLSKSSFLKCAYEDYDIFKFKV
>Mature_667_residues
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFNDTINWIPEEEGEYIIMVQAKREDSTKP
FDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVESNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQ
ELMVECKDLKSVKDYDDSFKVAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNSPQMTDTAIELKINAEGGKEL
LYKFIIKGKHMEDSGYIRNNIYTWTPSIPGKYSIEAWVKDSSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVL
KGEEVEIRAISNGGNNVRYAFSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYIPKCSGAYTIEVLAKNKESEE
IYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSVDSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEG
EYEVLVLSKSSFLKCAYEDYDIFKFKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77996; Mature: 77996

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFNDTINWIP
CCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
EEEGEYIIMVQAKREDSTKPFDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVE
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHHHHHHHHH
SNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQELMVECKDLKSVKDYDDSFK
CCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE
VAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
EEEEECCCCCEEEEEECHHHHHHHCCCHHEEHHHHHHHCCHHEEEEEEEECCCCHHHHHH
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNS
HCCCCCEEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHEEEHHHHHHHEEEEEECCCCC
PQMTDTAIELKINAEGGKELLYKFIIKGKHMEDSGYIRNNIYTWTPSIPGKYSIEAWVKD
CCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCEEEECCCCCCCEEEEEEEEC
SSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVLKGEEVEIRAISNGGNNVRYA
CCCCCCCCCCCCEEEEEEEHHHCCCHHEEEHHHHCCCEEECCCEEEEEEEECCCCEEEEE
FSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
EEECCCCCCCCCEECCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCH
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYI
HHHHHHHCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEC
PKCSGAYTIEVLAKNKESEEIYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSV
CCCCCCEEEEEEECCCCCHHHHCCHHHHHEEEHHCCCCCCCEEEECCCCEEECCEEEEEE
DSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEGEYEVLVLSKSSFLKCAYEDY
ECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEEECCC
DIFKFKV
EEEEEEC
>Mature Secondary Structure
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFNDTINWIP
CCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
EEEGEYIIMVQAKREDSTKPFDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVE
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHHHHHHHHH
SNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQELMVECKDLKSVKDYDDSFK
CCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE
VAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
EEEEECCCCCEEEEEECHHHHHHHCCCHHEEHHHHHHHCCHHEEEEEEEECCCCHHHHHH
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNS
HCCCCCEEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHEEEHHHHHHHEEEEEECCCCC
PQMTDTAIELKINAEGGKELLYKFIIKGKHMEDSGYIRNNIYTWTPSIPGKYSIEAWVKD
CCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEECCEEEECCCCCCCEEEEEEEEC
SSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVLKGEEVEIRAISNGGNNVRYA
CCCCCCCCCCCCEEEEEEEHHHCCCHHEEEHHHHCCCEEECCCEEEEEEEECCCCEEEEE
FSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
EEECCCCCCCCCEECCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCH
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYI
HHHHHHHCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEC
PKCSGAYTIEVLAKNKESEEIYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSV
CCCCCCEEEEEEECCCCCHHHHCCHHHHHEEEHHCCCCCCCEEEECCCCEEECCEEEEEE
DSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEGEYEVLVLSKSSFLKCAYEDY
ECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEEECCC
DIFKFKV
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA