| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 226950603
GI number: 226950603
Start: 3623884
End: 3624819
Strand: Reverse
Name: recX [H]
Synonym: CLM_3586
Alternate gene names: 226950603
Gene position: 3624819-3623884 (Counterclockwise)
Preceding gene: 226950604
Following gene: 226950602
Centisome position: 87.23
GC content: 20.51
Gene sequence:
>936_bases ATGTCAAATATTATTACTAAAATAGAAGTTCAAAAGAGGAATAAAGATAGGGTAAATGTTTATATAGATGAAGAGTTTAA TTTTGCTTGTAGCTCAGAATTAATATATTATCATAATCTTAAAAAGGGAAAAGTTATAGATGAAAATAGTCTTAATGATA TAATTAAAGAAGATAATTATATAAAAGCTAAAGGTTATGCATTAAAATATATAGAAAAATCTTTAAAAACAGAAAGTCAG GTTAAAGAAAAGCTATATTTAAAAGAATATGATGAGGATACTGTAAATAAGGTTATTAGATTTTTAAAGGATTATAATTT TATTGATGATGATAAATATTGTGATATGTATATAAGAGAAAAGTTAAATATCTATGGAAGAAATAAAATAAAATATACTC TTTTAAATAAAGGAGTAAAGGAAAACATAGTAATTGAAAAGATAAATAATATAAATGAAGAAAAAGAAAAAAAAGTAGCC TATAAATTAGCAGAGAAAAAATATAAAATTATGATATTAAGGGAAAAAGATAAATTTAAAATATATAAAAAAATATGGCC ATACATTATATCCAGGGGATATAATTCTAACATTGCTGAATGGATAATAAATGAGCTTAAATCTAATGAAGCTTTATATA AAGACAATAGTATATGCTTAGATGAACAAAATATGAAATTAAGTCAAAATATAGAAAATAACATAAAAGACGAAAATATA GAAAAATTTCATAATAATTCATCTTTTAACAGTAAAAATAATAGTTATAAAGAGAATATTGATATACTTGCTAGAAAAAG ATATGATATTATAATAAAATCAGAAGATGATAAAAATAAAATTTATAGAAGATTAAGTAATTACTTGTTGAGAAGGGGAT TTAGTTTTGAAGAAGTAAAGAAAAGTACAAATCGTGTTTTATATGAAAGAGAATAA
Upstream 100 bases:
>100_bases AATAAAAGAAGAAGATATATATAATGTAGCTAATAAAGTATTAAATAAACCTACTATACACATACTTTTAAATCAATAAC CGTTTCGGGAGTGCAAAAAT
Downstream 100 bases:
>100_bases AGGAATAAGAGGTTGGTGTTAGATATGAAAACAAATCCAGTTACTTTGATATTAGCTGCAGTGTTTTTTTTCCCTATTTT AAAAGGCTTTCTTTCAAAGT
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDENSLNDIIKEDNYIKAKGYALKYIEKSLKTESQ VKEKLYLKEYDEDTVNKVIRFLKDYNFIDDDKYCDMYIREKLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVA YKLAEKKYKIMILREKDKFKIYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNSICLDEQNMKLSQNIENNIKDENI EKFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVKKSTNRVLYERE
Sequences:
>Translated_311_residues MSNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDENSLNDIIKEDNYIKAKGYALKYIEKSLKTESQ VKEKLYLKEYDEDTVNKVIRFLKDYNFIDDDKYCDMYIREKLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVA YKLAEKKYKIMILREKDKFKIYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNSICLDEQNMKLSQNIENNIKDENI EKFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVKKSTNRVLYERE >Mature_310_residues SNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDENSLNDIIKEDNYIKAKGYALKYIEKSLKTESQV KEKLYLKEYDEDTVNKVIRFLKDYNFIDDDKYCDMYIREKLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVAY KLAEKKYKIMILREKDKFKIYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNSICLDEQNMKLSQNIENNIKDENIE KFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVKKSTNRVLYERE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 37564; Mature: 37433
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDENSLNDIIKEDNY CCCCEEEEEEECCCCCEEEEEEECCCCCEECCCEEEEECCCCCCEECCCCHHHHHCCCCE IKAKGYALKYIEKSLKTESQVKEKLYLKEYDEDTVNKVIRFLKDYNFIDDDKYCDMYIRE EEECCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVAYKLAEKKYKIMILREKDKFK HHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCHHH IYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNSICLDEQNMKLSQNIENNIKDENI HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHHCCCCCHH EKFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVK HHHCCCCCCCCCCCCHHHHHHHHEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH KSTNRVLYERE HHHCCEEEECC >Mature Secondary Structure SNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDENSLNDIIKEDNY CCCEEEEEEECCCCCEEEEEEECCCCCEECCCEEEEECCCCCCEECCCCHHHHHCCCCE IKAKGYALKYIEKSLKTESQVKEKLYLKEYDEDTVNKVIRFLKDYNFIDDDKYCDMYIRE EEECCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVAYKLAEKKYKIMILREKDKFK HHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCHHH IYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNSICLDEQNMKLSQNIENNIKDENI HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCEEECCCCCHHHHHHHHCCCCCHH EKFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVK HHHCCCCCCCCCCCCHHHHHHHHEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH KSTNRVLYERE HHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA