| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950602
Identifier: 226950602
GI number: 226950602
Start: 3622684
End: 3623859
Strand: Reverse
Name: 226950602
Synonym: CLM_3585
Alternate gene names: NA
Gene position: 3623859-3622684 (Counterclockwise)
Preceding gene: 226950603
Following gene: 226950598
Centisome position: 87.21
GC content: 24.74
Gene sequence:
>1176_bases ATGAAAACAAATCCAGTTACTTTGATATTAGCTGCAGTGTTTTTTTTCCCTATTTTAAAAGGCTTTCTTTCAAAGTTTTC TTCTCCAAATTTAAAATTAGATATAGAAGATATAAATAAAACTATATCTTTTGTGATTTCTTTATTTCTAGGCATATATT ATAGTAAAAAAATATTCATAGAACATAATGTAGGCATATATAAAGATATATATGAAAGAATACCTAAAAATATAATAAAA TATATAGATAATAATTTTTTTATGGTATATGTAGTATTAACACCCTTAATAATATTTATAATTTATAAAATAATATTTTT AATACTAGATATTTTAAATTCTATAACAATATATCCTATATTAGATAAATTGGAAGACATTTTAAGAGATAAGGGAAATA TATTTAAAAGAATATTCGGAGCCTTATTTAATATACCTAAATCCATATGTTATGTGTTATTAATAGCTTTTGTATTAAAT ATATTTTCTATGTTCACTAAAAATGATACTTTAAATAAATATCTTCAATCATCTAAAATTTATAATAATATATGTAAACA AGCCATAATACCTGTTACTAACTCTAAAATAGCCAAAAAATTACCTAATATAATAAATAATTCTTTTAAAATAGTGGTAA AAGAAGAGGCAGGGAAAAATTCATCGCAACAAAATAATTTTAAGGATAAAAAAACCATTGTATATTATAATGGGGTAACA TTAGAAGAAGGGATAAAATCTAATAAACAAATAAATAATTTTGCAAGACACTTAGCGGCAGAAGATGCTACATCAAAAGG AAAAGCAAAAATAATATATGATTGGATCGGTACTAATATATCTTATGATCATGATAAGGCTGAGAAAGTTCTCAAGGATA ATTTTCAGGTAAAATCTGGAGCTATCCCTACATTTAATAGTAAGAGCGGAATTTGTTTTGATTATTCCTGTTTATTTATA GCTATGTGTAGAGCAAATGACATAAAGGTAAGATTAGTTACAGGTGAAGGATTTAATGGTGTAAGTTGGGTAAGTCATGC ATGGAATCAAGTATATATACCCGAAGAAGGAAGATGGATTAATGTGGATGCAACTTTTTATAAAGGAGGCAACTATTTTG ATACCAAAAGATTTGATATAGATCATAGAAAATCTCAAATTGCAGGGGAATGGTAA
Upstream 100 bases:
>100_bases TTACTTGTTGAGAAGGGGATTTAGTTTTGAAGAAGTAAAGAAAAGTACAAATCGTGTTTTATATGAAAGAGAATAAAGGA ATAAGAGGTTGGTGTTAGAT
Downstream 100 bases:
>100_bases AAATGCTAGTAGCTTTTATATAAAAGTTACTAGCATTTTATATAGATTAATATTTATTTTTATATTATAGTTAAAAATCA TTAAATTAATTAATTTTATA
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like Cysteine Protease; Transglutaminase-Like Family Protein; Cysteine Protease; Membrane-Bound Protein; Transglutaminase-Like Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKTNPVTLILAAVFFFPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFIEHNVGIYKDIYERIPKNIIK YIDNNFFMVYVVLTPLIIFIIYKIIFLILDILNSITIYPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLN IFSMFTKNDTLNKYLQSSKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSQQNNFKDKKTIVYYNGVT LEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSGAIPTFNSKSGICFDYSCLFI AMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW
Sequences:
>Translated_391_residues MKTNPVTLILAAVFFFPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFIEHNVGIYKDIYERIPKNIIK YIDNNFFMVYVVLTPLIIFIIYKIIFLILDILNSITIYPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLN IFSMFTKNDTLNKYLQSSKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSQQNNFKDKKTIVYYNGVT LEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSGAIPTFNSKSGICFDYSCLFI AMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW >Mature_391_residues MKTNPVTLILAAVFFFPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFIEHNVGIYKDIYERIPKNIIK YIDNNFFMVYVVLTPLIIFIIYKIIFLILDILNSITIYPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLN IFSMFTKNDTLNKYLQSSKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSQQNNFKDKKTIVYYNGVT LEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSGAIPTFNSKSGICFDYSCLFI AMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44946; Mature: 44946
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNPVTLILAAVFFFPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEE EHNVGIYKDIYERIPKNIIKYIDNNFFMVYVVLTPLIIFIIYKIIFLILDILNSITIYPI ECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHH LDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLNIFSMFTKNDTLNKYLQSSKI HHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSQQNNFKDKKTIVYYNGVT HHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCEE LEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSG HHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEECCC AIPTFNSKSGICFDYSCLFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWI CCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCEEEECCCCCEE NVDATFYKGGNYFDTKRFDIDHRKSQIAGEW EEEEEEECCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MKTNPVTLILAAVFFFPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCEEEE EHNVGIYKDIYERIPKNIIKYIDNNFFMVYVVLTPLIIFIIYKIIFLILDILNSITIYPI ECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHH LDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLNIFSMFTKNDTLNKYLQSSKI HHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSQQNNFKDKKTIVYYNGVT HHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCEE LEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSG HHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEECCC AIPTFNSKSGICFDYSCLFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWI CCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCEEEECCCCCEE NVDATFYKGGNYFDTKRFDIDHRKSQIAGEW EEEEEEECCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA