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The map label for this gene is 226950586

Identifier: 226950586

GI number: 226950586

Start: 3601256

End: 3601957

Strand: Reverse

Name: 226950586

Synonym: CLM_3569

Alternate gene names: NA

Gene position: 3601957-3601256 (Counterclockwise)

Preceding gene: 226950587

Following gene: 226950584

Centisome position: 86.68

GC content: 29.63

Gene sequence:

>702_bases
ATGATGGACAATTTAATGTTAAACAATAAAATTTATTTAGAGGGAACAGTGGTTGAGGATTTAGAATTCAGTCACGAAAT
GTACGGAGAAGGATTTTATAATTTTAAAATGGAAGTTTCAAGATTAAGCGATGTATCAGATATATTAAATATAACTGTAT
CTGAAAGATTGTTAGCGGATATGGAACTAAAAGTAGGTATGGATATTATAGTAGAGGGTCAGCTAAGATCTTATAATAAA
TTTGTAGATGGCAGCAATAGACTTATATTAACTGTATTTGCTAGAAACATAGAATATTGTATTGAAAGAAGTAAAAACCC
TAATGAAATATTTTTAGATGGATATATATGTAAGGAGCCTATATATAGGACAACTCCCTTTGGTAGGGAAATCGCTGATT
TATTATTAGCAGTAAATAGACCTTATAACAAGTCAGATTATATCCCTAATATATCCTGGGGAAGAAATGCTAGATTTTGT
AAAACTTTACAAGTAGGAGATAATATAAGAGTTTGGGGAAGATTACAAAGTAGATATTACCAAAAGAGAATTTCAGAGGA
TAAAACTATTACTAAAGTAGCTTATGAGGTTTCTATATCAAAGATGGAGAGAGTAGGAGATGAACAAGCCGGGGATAATG
ATTATGAAGAAAGTTATGAAGAAAAGGATTTTATGGATAATATAAAAGAAAAACATGCATAA

Upstream 100 bases:

>100_bases
TTAATTCTACAAATAAGTTTTAATTTTATGGCATATTTTAGATATATAAATAATAAATATATGTTGTATGAATGAATTGA
AACTAAGGGAAAGAGGGGTT

Downstream 100 bases:

>100_bases
AGAATAGTATGTACAACTTTTTAAGTTGTACATACTATTCTCAAGTATATTTAAATAAATTAATAGAAAACTTTATCAAA
TATGAAAGGTAGTTTTAAAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MMDNLMLNNKIYLEGTVVEDLEFSHEMYGEGFYNFKMEVSRLSDVSDILNITVSERLLADMELKVGMDIIVEGQLRSYNK
FVDGSNRLILTVFARNIEYCIERSKNPNEIFLDGYICKEPIYRTTPFGREIADLLLAVNRPYNKSDYIPNISWGRNARFC
KTLQVGDNIRVWGRLQSRYYQKRISEDKTITKVAYEVSISKMERVGDEQAGDNDYEESYEEKDFMDNIKEKHA

Sequences:

>Translated_233_residues
MMDNLMLNNKIYLEGTVVEDLEFSHEMYGEGFYNFKMEVSRLSDVSDILNITVSERLLADMELKVGMDIIVEGQLRSYNK
FVDGSNRLILTVFARNIEYCIERSKNPNEIFLDGYICKEPIYRTTPFGREIADLLLAVNRPYNKSDYIPNISWGRNARFC
KTLQVGDNIRVWGRLQSRYYQKRISEDKTITKVAYEVSISKMERVGDEQAGDNDYEESYEEKDFMDNIKEKHA
>Mature_233_residues
MMDNLMLNNKIYLEGTVVEDLEFSHEMYGEGFYNFKMEVSRLSDVSDILNITVSERLLADMELKVGMDIIVEGQLRSYNK
FVDGSNRLILTVFARNIEYCIERSKNPNEIFLDGYICKEPIYRTTPFGREIADLLLAVNRPYNKSDYIPNISWGRNARFC
KTLQVGDNIRVWGRLQSRYYQKRISEDKTITKVAYEVSISKMERVGDEQAGDNDYEESYEEKDFMDNIKEKHA

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27277; Mature: 27277

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDNLMLNNKIYLEGTVVEDLEFSHEMYGEGFYNFKMEVSRLSDVSDILNITVSERLLAD
CCCCEEECCEEEEEEEEHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
MELKVGMDIIVEGQLRSYNKFVDGSNRLILTVFARNIEYCIERSKNPNEIFLDGYICKEP
HHHCCCCEEEEECCHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEECEECCCC
IYRTTPFGREIADLLLAVNRPYNKSDYIPNISWGRNARFCKTLQVGDNIRVWGRLQSRYY
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHH
QKRISEDKTITKVAYEVSISKMERVGDEQAGDNDYEESYEEKDFMDNIKEKHA
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDNLMLNNKIYLEGTVVEDLEFSHEMYGEGFYNFKMEVSRLSDVSDILNITVSERLLAD
CCCCEEECCEEEEEEEEHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
MELKVGMDIIVEGQLRSYNKFVDGSNRLILTVFARNIEYCIERSKNPNEIFLDGYICKEP
HHHCCCCEEEEECCHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEECEECCCC
IYRTTPFGREIADLLLAVNRPYNKSDYIPNISWGRNARFCKTLQVGDNIRVWGRLQSRYY
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHH
QKRISEDKTITKVAYEVSISKMERVGDEQAGDNDYEESYEEKDFMDNIKEKHA
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA