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The map label for this gene is 226950124

Identifier: 226950124

GI number: 226950124

Start: 3075529

End: 3076866

Strand: Reverse

Name: 226950124

Synonym: CLM_3078

Alternate gene names: NA

Gene position: 3076866-3075529 (Counterclockwise)

Preceding gene: 226950125

Following gene: 226950123

Centisome position: 74.05

GC content: 23.84

Gene sequence:

>1338_bases
ATGGAAAATTTAAAGTTTGCTACTTTAAGATTGTACCGAACATGTAATTATAAATGCAGTTATTGTTTTGTACCGGATAA
TGATAAAATGAGTAATTTCGGTAGAGCAGTAACAGAAGAAGGCATGGGAAAAATATTTAAATTTTTTGATGAAAGAGGAG
AATGGCACATACAATTAACAGGAGGAGAGCCAACAATTCATCCTCACTTTATAGAGTTTTGTGAAAGACTAAGTAAGAAC
CATTATTTAAATATGGGGACTAATAATTCAATAAGTTATGATAAACTAAGAGAATTTATAAAAAAAATAGATCCAAATAA
GATAGATTATATACAGTGTTCTTTACAAGAAGTAGATGAAGAAGAAAGATTTAAAGATTTCTTAAATAAGATGATTATTT
ATAAAGAAAATAATTTTAAAGCATATGTTAGCTATGTTGCTGTGCCAGACAGATTAGATAGAGTAAAAAAATATTATGAT
ATATTTTCTTATTATGACATACCTTTTGTAGTTCAAGTGTTTAGTGGTAAATATAAAAATAAAGAATATCCTAGAGATTA
TACACAAGATGAAATAGATTATTTAGATCAATATATGATGTCATCAATGTATAGAGCTTTATTAGACATTGGCGATAGGT
ATCCAACTTGTAAATTATGTGCTGCAGGAAAAAGGAGGATATTAGTAGATGCTTTATCCGGTAAAGTTTTTAAATGTCTT
AATGAAAGTGAGCCTATAGGAAATATATATAACAATAAATTAAATTTGAATGATAAGTATTTAAAATGTAGAGCTAAAAA
ATGTAGTTGTATTTTTGAACCACATTTAGATGTAGAGCCTATATTATACAAGGATTTTGAAAATATTTTTAATGGAAAAA
AACATTATGATAAGGAACTTTATGAACTATATAAAAATAATTCAATTGGAAATGAAGAATATAAAAAATATTGGGCAGAA
ATAGAAATAAAAAAATTAGAAAAAAAGATTATTACATTAAAAAATATGTTTAAAGATAGTGCTAATAAAAATATAGGTAT
ATATGGTACCGGAGAACATACTAAAAAAATGTTAGATGATTATAAGAGATATATAGATGAAATAAAATTTAATATATGTT
TATTCAATTCTAACTCTGATCTATGGAATAAAGAATATTTAGGATTTCAAATACATAATCCTATAGAAATACCTAATTTA
GACTTAGATAGAGTTATAATATCTAGTTATGAATTTCAAAATGAAATATACGATTCAATAAAAAAATATGAGAGTAATGA
AATAAACATTGTAAAAATATATAAAGATAAAGAGGAAATTATGTTTACTTATAAATAA

Upstream 100 bases:

>100_bases
AAAGAAGCAGATGAGCATGGATTTATTTATTGGAGAATATAAGGAGCGGAATTTGCTTTGAAATAGACTATACATATTGA
TGTATGAAAGGAATGCTTTT

Downstream 100 bases:

>100_bases
ATTACAAATTTTATATCTAAAAAGGAGTTATTATGAAAATTTGTATACTATCTATAAATCATGATTTGTTTGATGATAGG
ATATATTGGAAAGAGGCTCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase-Like

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MENLKFATLRLYRTCNYKCSYCFVPDNDKMSNFGRAVTEEGMGKIFKFFDERGEWHIQLTGGEPTIHPHFIEFCERLSKN
HYLNMGTNNSISYDKLREFIKKIDPNKIDYIQCSLQEVDEEERFKDFLNKMIIYKENNFKAYVSYVAVPDRLDRVKKYYD
IFSYYDIPFVVQVFSGKYKNKEYPRDYTQDEIDYLDQYMMSSMYRALLDIGDRYPTCKLCAAGKRRILVDALSGKVFKCL
NESEPIGNIYNNKLNLNDKYLKCRAKKCSCIFEPHLDVEPILYKDFENIFNGKKHYDKELYELYKNNSIGNEEYKKYWAE
IEIKKLEKKIITLKNMFKDSANKNIGIYGTGEHTKKMLDDYKRYIDEIKFNICLFNSNSDLWNKEYLGFQIHNPIEIPNL
DLDRVIISSYEFQNEIYDSIKKYESNEINIVKIYKDKEEIMFTYK

Sequences:

>Translated_445_residues
MENLKFATLRLYRTCNYKCSYCFVPDNDKMSNFGRAVTEEGMGKIFKFFDERGEWHIQLTGGEPTIHPHFIEFCERLSKN
HYLNMGTNNSISYDKLREFIKKIDPNKIDYIQCSLQEVDEEERFKDFLNKMIIYKENNFKAYVSYVAVPDRLDRVKKYYD
IFSYYDIPFVVQVFSGKYKNKEYPRDYTQDEIDYLDQYMMSSMYRALLDIGDRYPTCKLCAAGKRRILVDALSGKVFKCL
NESEPIGNIYNNKLNLNDKYLKCRAKKCSCIFEPHLDVEPILYKDFENIFNGKKHYDKELYELYKNNSIGNEEYKKYWAE
IEIKKLEKKIITLKNMFKDSANKNIGIYGTGEHTKKMLDDYKRYIDEIKFNICLFNSNSDLWNKEYLGFQIHNPIEIPNL
DLDRVIISSYEFQNEIYDSIKKYESNEINIVKIYKDKEEIMFTYK
>Mature_445_residues
MENLKFATLRLYRTCNYKCSYCFVPDNDKMSNFGRAVTEEGMGKIFKFFDERGEWHIQLTGGEPTIHPHFIEFCERLSKN
HYLNMGTNNSISYDKLREFIKKIDPNKIDYIQCSLQEVDEEERFKDFLNKMIIYKENNFKAYVSYVAVPDRLDRVKKYYD
IFSYYDIPFVVQVFSGKYKNKEYPRDYTQDEIDYLDQYMMSSMYRALLDIGDRYPTCKLCAAGKRRILVDALSGKVFKCL
NESEPIGNIYNNKLNLNDKYLKCRAKKCSCIFEPHLDVEPILYKDFENIFNGKKHYDKELYELYKNNSIGNEEYKKYWAE
IEIKKLEKKIITLKNMFKDSANKNIGIYGTGEHTKKMLDDYKRYIDEIKFNICLFNSNSDLWNKEYLGFQIHNPIEIPNL
DLDRVIISSYEFQNEIYDSIKKYESNEINIVKIYKDKEEIMFTYK

Specific function: Unknown

COG id: COG4641

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53304; Mature: 53304

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLKFATLRLYRTCNYKCSYCFVPDNDKMSNFGRAVTEEGMGKIFKFFDERGEWHIQLT
CCCCEEHHEEEEHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GGEPTIHPHFIEFCERLSKNHYLNMGTNNSISYDKLREFIKKIDPNKIDYIQCSLQEVDE
CCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCH
EERFKDFLNKMIIYKENNFKAYVSYVAVPDRLDRVKKYYDIFSYYDIPFVVQVFSGKYKN
HHHHHHHHHHEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
KEYPRDYTQDEIDYLDQYMMSSMYRALLDIGDRYPTCKLCAAGKRRILVDALSGKVFKCL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEHHCCHHHHHC
NESEPIGNIYNNKLNLNDKYLKCRAKKCSCIFEPHLDVEPILYKDFENIFNGKKHYDKEL
CCCCCCCCHHCCCCCCCHHHHHEECCCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHH
YELYKNNSIGNEEYKKYWAEIEIKKLEKKIITLKNMFKDSANKNIGIYGTGEHTKKMLDD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
YKRYIDEIKFNICLFNSNSDLWNKEYLGFQIHNPIEIPNLDLDRVIISSYEFQNEIYDSI
HHHHHHHHEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KKYESNEINIVKIYKDKEEIMFTYK
HHCCCCCEEEEEEEECCCCEEEEEC
>Mature Secondary Structure
MENLKFATLRLYRTCNYKCSYCFVPDNDKMSNFGRAVTEEGMGKIFKFFDERGEWHIQLT
CCCCEEHHEEEEHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GGEPTIHPHFIEFCERLSKNHYLNMGTNNSISYDKLREFIKKIDPNKIDYIQCSLQEVDE
CCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCH
EERFKDFLNKMIIYKENNFKAYVSYVAVPDRLDRVKKYYDIFSYYDIPFVVQVFSGKYKN
HHHHHHHHHHEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
KEYPRDYTQDEIDYLDQYMMSSMYRALLDIGDRYPTCKLCAAGKRRILVDALSGKVFKCL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEHHCCHHHHHC
NESEPIGNIYNNKLNLNDKYLKCRAKKCSCIFEPHLDVEPILYKDFENIFNGKKHYDKEL
CCCCCCCCHHCCCCCCCHHHHHEECCCCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHH
YELYKNNSIGNEEYKKYWAEIEIKKLEKKIITLKNMFKDSANKNIGIYGTGEHTKKMLDD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
YKRYIDEIKFNICLFNSNSDLWNKEYLGFQIHNPIEIPNLDLDRVIISSYEFQNEIYDSI
HHHHHHHHEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KKYESNEINIVKIYKDKEEIMFTYK
HHCCCCCEEEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA