| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226950114
Identifier: 226950114
GI number: 226950114
Start: 3064244
End: 3065107
Strand: Reverse
Name: 226950114
Synonym: CLM_3068
Alternate gene names: NA
Gene position: 3065107-3064244 (Counterclockwise)
Preceding gene: 226950115
Following gene: 226950113
Centisome position: 73.76
GC content: 24.31
Gene sequence:
>864_bases ATGAAAGATAATGTAGTGATATTTGGAGCTTCTACTAGAGGACGTTATGTGTATGAAAAATTAAAAAATAAATATAAAAT AATATATTTTTGTGATAATGATATAAAGAAAAATGGCAATAGGATAAATGGTATTGAAATAATATTGCCACAAAAATTAT ATAGTTTAAGAAATTGTAGAATAATAATAGCAAGTATGTATCATGAAGAAATTTACAGTCAATTAAATGAAATGGGTATT AGTAATGTAGAAGTATATCCATCTAATATAGAATGTACTATGAAAAGGATAGAAGAAAAGGGTGTAATTTTAAATGAGAT GGATGTTCTTGAAGTATTTGGTGGCAGTGGGAAATCTGTTGATAGATATGTTTTAGATAAAGTTAAAAAGCTAGACGTAT GGGAAATAGATAAAAATAGAGAGATAGAATTAAAAAGTAATTTGCCTAAAGCTGAAATAAAAATAGTAGATTCATTTAAT GAAGTAAAAACAACTAAAAGTGAATATGATGTTATAATAATTGATAATCCCATGGCTATGTTTGCTAATCATTGTGAACA TTTTGATATGTTTATACATATATTTAATATCTTAAAGGATGAGGGGCTAATTATATTAGATATAATCCCTAATTTAGAGG ATATGCCAACTGAATTTCAAGCTTTAAAAGAAGATATACATTTACTTTGTAGAAAATTATTTTATAGGACTGAAAATCCT TTAAATATACCGATAAAAGATATTGTATCTACATATGAAGATATCATAAATAAGAATGGATATATTTTGGAATGGAATTT CGCAGAAGAAAGAAGTAAAGATTTTATCTATTATTTAGTTTTAAAAGTAAAGAAAACTAATTAA
Upstream 100 bases:
>100_bases ATTTCAACTAAATGAAAGTGAAATAAAAAAGTATGAAAGAAAAAATTTAACTAAAAAGTTAGCAGAAATCTTCGATGGTA TATTGGAGGAATAAGCAATT
Downstream 100 bases:
>100_bases ATATTGGTGGTGATATAGTGGTAAGCGTAATAATTGCTGTATATAATGGAGAAAAGTACATTAAGGAAGCTGTAGAAAGT ATATTGAATCAGACATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKDNVVIFGASTRGRYVYEKLKNKYKIIYFCDNDIKKNGNRINGIEIILPQKLYSLRNCRIIIASMYHEEIYSQLNEMGI SNVEVYPSNIECTMKRIEEKGVILNEMDVLEVFGGSGKSVDRYVLDKVKKLDVWEIDKNREIELKSNLPKAEIKIVDSFN EVKTTKSEYDVIIIDNPMAMFANHCEHFDMFIHIFNILKDEGLIILDIIPNLEDMPTEFQALKEDIHLLCRKLFYRTENP LNIPIKDIVSTYEDIINKNGYILEWNFAEERSKDFIYYLVLKVKKTN
Sequences:
>Translated_287_residues MKDNVVIFGASTRGRYVYEKLKNKYKIIYFCDNDIKKNGNRINGIEIILPQKLYSLRNCRIIIASMYHEEIYSQLNEMGI SNVEVYPSNIECTMKRIEEKGVILNEMDVLEVFGGSGKSVDRYVLDKVKKLDVWEIDKNREIELKSNLPKAEIKIVDSFN EVKTTKSEYDVIIIDNPMAMFANHCEHFDMFIHIFNILKDEGLIILDIIPNLEDMPTEFQALKEDIHLLCRKLFYRTENP LNIPIKDIVSTYEDIINKNGYILEWNFAEERSKDFIYYLVLKVKKTN >Mature_287_residues MKDNVVIFGASTRGRYVYEKLKNKYKIIYFCDNDIKKNGNRINGIEIILPQKLYSLRNCRIIIASMYHEEIYSQLNEMGI SNVEVYPSNIECTMKRIEEKGVILNEMDVLEVFGGSGKSVDRYVLDKVKKLDVWEIDKNREIELKSNLPKAEIKIVDSFN EVKTTKSEYDVIIIDNPMAMFANHCEHFDMFIHIFNILKDEGLIILDIIPNLEDMPTEFQALKEDIHLLCRKLFYRTENP LNIPIKDIVSTYEDIINKNGYILEWNFAEERSKDFIYYLVLKVKKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33748; Mature: 33748
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDNVVIFGASTRGRYVYEKLKNKYKIIYFCDNDIKKNGNRINGIEIILPQKLYSLRNCR CCCCEEEEECCCCCHHHHHHHCCCEEEEEEECCCHHCCCCEECCEEEEECHHHHHHCCCE IIIASMYHEEIYSQLNEMGISNVEVYPSNIECTMKRIEEKGVILNEMDVLEVFGGSGKSV EEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEECCCHHHHHCCCCCCCH DRYVLDKVKKLDVWEIDKNREIELKSNLPKAEIKIVDSFNEVKTTKSEYDVIIIDNPMAM HHHHHHHHHCCCEEECCCCCEEEECCCCCCEEEEEEECHHHHHCCCCCCCEEEECCCHHH FANHCEHFDMFIHIFNILKDEGLIILDIIPNLEDMPTEFQALKEDIHLLCRKLFYRTENP HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC LNIPIKDIVSTYEDIINKNGYILEWNFAEERSKDFIYYLVLKVKKTN CCCCHHHHHHHHHHHHCCCCEEEEEECHHHCCCCEEEEEEEEEEECC >Mature Secondary Structure MKDNVVIFGASTRGRYVYEKLKNKYKIIYFCDNDIKKNGNRINGIEIILPQKLYSLRNCR CCCCEEEEECCCCCHHHHHHHCCCEEEEEEECCCHHCCCCEECCEEEEECHHHHHHCCCE IIIASMYHEEIYSQLNEMGISNVEVYPSNIECTMKRIEEKGVILNEMDVLEVFGGSGKSV EEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEECCCHHHHHCCCCCCCH DRYVLDKVKKLDVWEIDKNREIELKSNLPKAEIKIVDSFNEVKTTKSEYDVIIIDNPMAM HHHHHHHHHCCCEEECCCCCEEEECCCCCCEEEEEEECHHHHHCCCCCCCEEEECCCHHH FANHCEHFDMFIHIFNILKDEGLIILDIIPNLEDMPTEFQALKEDIHLLCRKLFYRTENP HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC LNIPIKDIVSTYEDIINKNGYILEWNFAEERSKDFIYYLVLKVKKTN CCCCHHHHHHHHHHHHCCCCEEEEEECHHHCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA