Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

Click here to switch to the map view.

The map label for this gene is 226949742

Identifier: 226949742

GI number: 226949742

Start: 2693850

End: 2694623

Strand: Reverse

Name: 226949742

Synonym: CLM_2682

Alternate gene names: NA

Gene position: 2694623-2693850 (Counterclockwise)

Preceding gene: 226949743

Following gene: 226949741

Centisome position: 64.85

GC content: 29.84

Gene sequence:

>774_bases
ATGGAAAAGGTAGTTTTAAAGGTAGAAAATGGACAACCAGTAGTAAGTAGTAGAGAAGTTGCAGATGATTTTGGGAAAAG
ACATTCTCATGTAGTTGAAGCTATTGATAATAAAATAGAAAGTTTAACTGCCGAAAATTCGGAGGTTAAGATTTCAAAGT
TATTCATACCAACAACTTTTAATCATAATGGCAATGACTACAAGGAATATTTGTTAACTAGAGATGGATTTACATTTATA
GTTATGGGGTTTACAGGAGCCAAAGCTGATAGTTGGAAATTTAAATATATTGAAGCATTTAATAAGATGGAGCAATACAT
TAAAGAAAAGCAAAAACCTAAATGCATAGAAGATGTGCTTATACAAAGTTTACAAGAAATGAAAGATGTCAAATATCAGT
TAGAAACAGTTAAGAGAGAAGGTAAAGAAACCAAAGAAGAGGTACAAGCTATTAGAGATGTAGTTAAATTAGATACTACA
TCATGGAAAGAAGATTCTACTAAATTAATAAATAAAATAGCTCAAACTCTTGGTGGAAATGAATACATCAGGGAAGTAAG
AAGAGAGATTTATAAATTACTAGATAAAAGAATGGGTGTTAATTTAGAACAAAGACTTATTAATAAACGTAGAAGAATGG
CAGATGAAGGAGTATGTAAATCTAAAAGAGATAAATTAAATAAAGTAAGCGTAATAGGTGATGATAAGAAACTTATAGAG
GGCTATGTATACATAGTTAAGGAAATGGCTATTAAATACGGGGTAAAAGCTTAG

Upstream 100 bases:

>100_bases
TTTAGGTTCTGATTTAAACGAATTTAAAAAGAACAAATGATAATTTTAAATACTTACAGATGTAAAGTAATTAACTTTAA
ATTTTATAGGAGGTAAAAGC

Downstream 100 bases:

>100_bases
GGGGTGTAGATATTGACCGCAGTAGGACAAGCTATAACAACACTATATAGTCTGATTGCAATAACAGCTCTTATGATACT
AGATTTAAAAAGATTACTAA

Product: Gp26 protein

Products: NA

Alternate protein names: Rha Family Phage Regulatory Protein; Phage Regulatory Protein Rha Family; Phage Anti-Repressor; Phage-Encoded Protein-Like; Phage Protein; Phage Related Protein; Phage-Like Protein; Phage Associated Conserved Protein; Gp26 Protein; Phage-Related Antirepressor; Xin-Antitoxin System Toxin Component Bro Family; Phage Regulatory Protein; Phage Immunity Protein; Anti-Repressor

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTFNHNGNDYKEYLLTRDGFTFI
VMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVLIQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTT
SWKEDSTKLINKIAQTLGGNEYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE
GYVYIVKEMAIKYGVKA

Sequences:

>Translated_257_residues
MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTFNHNGNDYKEYLLTRDGFTFI
VMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVLIQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTT
SWKEDSTKLINKIAQTLGGNEYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE
GYVYIVKEMAIKYGVKA
>Mature_257_residues
MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTFNHNGNDYKEYLLTRDGFTFI
VMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVLIQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTT
SWKEDSTKLINKIAQTLGGNEYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE
GYVYIVKEMAIKYGVKA

Specific function: Unknown

COG id: COG3561

COG function: function code K; Phage anti-repressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29841; Mature: 29841

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTF
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC
NHNGNDYKEYLLTRDGFTFIVMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVL
CCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTTSWKEDSTKLINKIAQTLGGN
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH
EYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCHHEEEECCHHHHHH
GYVYIVKEMAIKYGVKA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEKVVLKVENGQPVVSSREVADDFGKRHSHVVEAIDNKIESLTAENSEVKISKLFIPTTF
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEC
NHNGNDYKEYLLTRDGFTFIVMGFTGAKADSWKFKYIEAFNKMEQYIKEKQKPKCIEDVL
CCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IQSLQEMKDVKYQLETVKREGKETKEEVQAIRDVVKLDTTSWKEDSTKLINKIAQTLGGN
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCH
EYIREVRREIYKLLDKRMGVNLEQRLINKRRRMADEGVCKSKRDKLNKVSVIGDDKKLIE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCHHEEEECCHHHHHH
GYVYIVKEMAIKYGVKA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA