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The map label for this gene is ykoG [H]

Identifier: 226949683

GI number: 226949683

Start: 2650512

End: 2651192

Strand: Reverse

Name: ykoG [H]

Synonym: CLM_2623

Alternate gene names: 226949683

Gene position: 2651192-2650512 (Counterclockwise)

Preceding gene: 226949684

Following gene: 226949682

Centisome position: 63.8

GC content: 30.69

Gene sequence:

>681_bases
ATGGTTAAGATTTTAATAGTTGAAGATGAAGAGAAATTATCAAGATTTATTGAGCTTGAGTTAAAACACGAAGGATATGA
AATAGTAAAAGCAAATAATGGTAGAACGGGTCTTGAAATTGCAGAAAAAGGTGAGGCTGATTTAGTTCTTCTTGATATAA
TGCTTCCAGAAATAAACGGTCTTGAAGTATTAAGAAGGCTTAGAAGAACTTCTGATATTCCAATTATAATGCTAACTGCA
AGAGATGCAGTTATGGATAAAGTATCAGGTCTTGATGCAGGAGCAGATGATTATATAACTAAGCCATTTGCAATAGAAGA
GTTACTTGCAAGAATAAGAACAGCCCTTAAAAAGAGAATAGTTACAGTGAAGAAAGATGAAGATATAATAAGATGTGGCT
TATTGTCATTAGATAAAATGAGACGTAAAGTAATGTATGATAGCACAGAGATAGAACTAACCAATAGAGAGTTTAATTTG
TTACAAATATTAATGGAAAACAAGAATATAGTGTTAACCAGAAGTATACTTATGGAAAAGGTATGTGGTTATGATTATCT
TGGAGAAACCAATGTTATAGATGTTTATATAAGGTTCTTAAGAACAAAAATAGATGATGCTTTTAAGGTTAAAATAATAA
CTACAGTTCGTGGTGTAGGATACGTAATTAAAGATGAGTAG

Upstream 100 bases:

>100_bases
TATTCAAAAAGCGTTGATACAGGTAAGGCTAATAAGATATTACAGAGTATTTCAAATCATGTAAAAATTATAAAAGAAAA
ATTTAAGAAGGCGGATAAGA

Downstream 100 bases:

>100_bases
AAAAAATAAAACAAAAAATGTTATATCTATTGCAATAAAATTAAACTCTGTTTTTGTAAGAAGTTTATTTTTAAAGTTTC
TTATCCTTGATATATGCATA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKGEADLVLLDIMLPEINGLEVLRRLRRTSDIPIIMLTA
RDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRIVTVKKDEDIIRCGLLSLDKMRRKVMYDSTEIELTNREFNL
LQILMENKNIVLTRSILMEKVCGYDYLGETNVIDVYIRFLRTKIDDAFKVKIITTVRGVGYVIKDE

Sequences:

>Translated_226_residues
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKGEADLVLLDIMLPEINGLEVLRRLRRTSDIPIIMLTA
RDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRIVTVKKDEDIIRCGLLSLDKMRRKVMYDSTEIELTNREFNL
LQILMENKNIVLTRSILMEKVCGYDYLGETNVIDVYIRFLRTKIDDAFKVKIITTVRGVGYVIKDE
>Mature_226_residues
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKGEADLVLLDIMLPEINGLEVLRRLRRTSDIPIIMLTA
RDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRIVTVKKDEDIIRCGLLSLDKMRRKVMYDSTEIELTNREFNL
LQILMENKNIVLTRSILMEKVCGYDYLGETNVIDVYIRFLRTKIDDAFKVKIITTVRGVGYVIKDE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=41.0714285714286, Blast_Score=175, Evalue=2e-45,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=39.0909090909091, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=36.4864864864865, Blast_Score=150, Evalue=5e-38,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=36.4864864864865, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=39.4618834080717, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.6964285714286, Blast_Score=126, Evalue=9e-31,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=35.2422907488987, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=33.1858407079646, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=35.3711790393013, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=32.2869955156951, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=36.036036036036, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=32.7433628318584, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=31.4159292035398, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=31.3559322033898, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=37.9310344827586, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790437, Length=118, Percent_Identity=32.2033898305085, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI48994928, Length=108, Percent_Identity=37.037037037037, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25979; Mature: 25979

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKGEADLVLLDIMLPEING
CEEEEEECCHHHHHHHEEEEECCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCH
LEVLRRLRRTSDIPIIMLTARDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRI
HHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHE
VTVKKDEDIIRCGLLSLDKMRRKVMYDSTEIELTNREFNLLQILMENKNIVLTRSILMEK
EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHEECCCCCEEEEHHHHHHH
VCGYDYLGETNVIDVYIRFLRTKIDDAFKVKIITTVRGVGYVIKDE
HCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECC
>Mature Secondary Structure
MVKILIVEDEEKLSRFIELELKHEGYEIVKANNGRTGLEIAEKGEADLVLLDIMLPEING
CEEEEEECCHHHHHHHEEEEECCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCH
LEVLRRLRRTSDIPIIMLTARDAVMDKVSGLDAGADDYITKPFAIEELLARIRTALKKRI
HHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHE
VTVKKDEDIIRCGLLSLDKMRRKVMYDSTEIELTNREFNLLQILMENKNIVLTRSILMEK
EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHEECCCCCEEEEHHHHHHH
VCGYDYLGETNVIDVYIRFLRTKIDDAFKVKIITTVRGVGYVIKDE
HCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]