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The map label for this gene is yqaS [H]

Identifier: 226949593

GI number: 226949593

Start: 2589129

End: 2589836

Strand: Reverse

Name: yqaS [H]

Synonym: CLM_2530

Alternate gene names: 226949593

Gene position: 2589836-2589129 (Counterclockwise)

Preceding gene: 226949594

Following gene: 226949592

Centisome position: 62.33

GC content: 32.34

Gene sequence:

>708_bases
ATGGAAAATATAAGAGGACCAGATGAAAAAGACCAGGCAAAACAAGATTACATTAAAGGTGTGAAATATAAAGACTTAGC
TGAAAAGTATTCAGTTAGTTTAAATACAATTAAGTCCTGGGTAAAAAGATATGGTTGGTCGGAAGAGAAAAAAAAGAAGG
GTGCACACAAGAATAAAAAGGGTGCACCCTTAAATAATAAAAATGCAGTAGGTCATGGAGCTCCAACAAAGAATAAGAAT
GCGGAGAAACATGGCTTCTTTTCTAAGTATTTACCGGAGGAAACTTTAGGGATAATGGAAGAAATAGAAACTAAGAAACC
TTTAGATATATTATGGGATCAAATAATGATACAGTATGCAGCAATAATAAGAGCACAAAAGATTATGCATGTTGAATCCA
AAGATGAGATGATAAAAGAATTGAAAAAGACAAAAGATTCATGGGCAGATAAGAGTTCCTCTGAAGAGAGAGAATATGAA
TTCCAGTTTGCTTGGGATAGACAGGCCACTTTTTTAAATGCACAGAGTAGAGCAATGGGGGAACTAAGAAGTTTAATAAA
ACAATATGATGAAATGTTAAATACTAATTGGAACATAGCTACAGAGGAACAAAAACTAAGAATTGAAAAACTTAAAGCTG
ATATAAATAAAGATGATAACAAGGATAAACCAATAGAAATACTAATCAAACGAAAGGGTAAGGATTAA

Upstream 100 bases:

>100_bases
ATTAGTTAAATTCTAGTAAAACATATTAATTTAACAAAGAGCTCATAGGGCTCTTTTTTATATACAAAACAAACAAAGCA
GCTAGCAACGAGGTGGTGGT

Downstream 100 bases:

>100_bases
TGCTTATAGTAAAAGAAGTTAATCTGCACTTTGAAAATTTTATATTTGATTGGAACTATAAGTTTTATTTTTTAGTAGGT
GGCTATGGTTCATCTAAGAG

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MENIRGPDEKDQAKQDYIKGVKYKDLAEKYSVSLNTIKSWVKRYGWSEEKKKKGAHKNKKGAPLNNKNAVGHGAPTKNKN
AEKHGFFSKYLPEETLGIMEEIETKKPLDILWDQIMIQYAAIIRAQKIMHVESKDEMIKELKKTKDSWADKSSSEEREYE
FQFAWDRQATFLNAQSRAMGELRSLIKQYDEMLNTNWNIATEEQKLRIEKLKADINKDDNKDKPIEILIKRKGKD

Sequences:

>Translated_235_residues
MENIRGPDEKDQAKQDYIKGVKYKDLAEKYSVSLNTIKSWVKRYGWSEEKKKKGAHKNKKGAPLNNKNAVGHGAPTKNKN
AEKHGFFSKYLPEETLGIMEEIETKKPLDILWDQIMIQYAAIIRAQKIMHVESKDEMIKELKKTKDSWADKSSSEEREYE
FQFAWDRQATFLNAQSRAMGELRSLIKQYDEMLNTNWNIATEEQKLRIEKLKADINKDDNKDKPIEILIKRKGKD
>Mature_235_residues
MENIRGPDEKDQAKQDYIKGVKYKDLAEKYSVSLNTIKSWVKRYGWSEEKKKKGAHKNKKGAPLNNKNAVGHGAPTKNKN
AEKHGFFSKYLPEETLGIMEEIETKKPLDILWDQIMIQYAAIIRAQKIMHVESKDEMIKELKKTKDSWADKSSSEEREYE
FQFAWDRQATFLNAQSRAMGELRSLIKQYDEMLNTNWNIATEEQKLRIEKLKADINKDDNKDKPIEILIKRKGKD

Specific function: Unknown

COG id: COG5484

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925 [H]

Pfam domain/function: PF10668 Phage_terminase [H]

EC number: NA

Molecular weight: Translated: 27483; Mature: 27483

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIRGPDEKDQAKQDYIKGVKYKDLAEKYSVSLNTIKSWVKRYGWSEEKKKKGAHKNKK
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
GAPLNNKNAVGHGAPTKNKNAEKHGFFSKYLPEETLGIMEEIETKKPLDILWDQIMIQYA
CCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AIIRAQKIMHVESKDEMIKELKKTKDSWADKSSSEEREYEFQFAWDRQATFLNAQSRAMG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHH
ELRSLIKQYDEMLNTNWNIATEEQKLRIEKLKADINKDDNKDKPIEILIKRKGKD
HHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MENIRGPDEKDQAKQDYIKGVKYKDLAEKYSVSLNTIKSWVKRYGWSEEKKKKGAHKNKK
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
GAPLNNKNAVGHGAPTKNKNAEKHGFFSKYLPEETLGIMEEIETKKPLDILWDQIMIQYA
CCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AIIRAQKIMHVESKDEMIKELKKTKDSWADKSSSEEREYEFQFAWDRQATFLNAQSRAMG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHH
ELRSLIKQYDEMLNTNWNIATEEQKLRIEKLKADINKDDNKDKPIEILIKRKGKD
HHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]