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The map label for this gene is yqaT [H]

Identifier: 226949592

GI number: 226949592

Start: 2587774

End: 2589129

Strand: Reverse

Name: yqaT [H]

Synonym: CLM_2529

Alternate gene names: 226949592

Gene position: 2589129-2587774 (Counterclockwise)

Preceding gene: 226949593

Following gene: 226949591

Centisome position: 62.31

GC content: 28.02

Gene sequence:

>1356_bases
ATGCTTATAGTAAAAGAAGTTAATCTGCACTTTGAAAATTTTATATTTGATTGGAACTATAAGTTTTATTTTTTAGTAGG
TGGCTATGGTTCATCTAAGAGTTATCATGTTGCTTTAAAATTAATACTTAAACTATTAGAAGAAAAAAGAACAGCCTTAG
TGGTGAGAGAAGTATATGACACTATTAGAGATTCTTGTTTTTCATTATTTGATGAAATAATAACCGAAATGGAATTAGAT
GATAGGATTAAATGTGTTACTTCTCCTATGCAAATAAGATTCCCTAACGGTAGTAAGATTATATTTAAAGGTATGGATAA
GCCAGCTAAATTAAAATCTATAAACAATGTATCTATAATATGGATAGAAGAATGTTCAGAAGTAAAATATGCTGGATTTA
AAGAACTTTTAGGAAGGTTAAGACATCCAACACTAGAACTACACATGATACTTTCTACTAATCCAGTATCAAAGAATAAC
TGGTGTTACAAACATTTTTTTATGGATACTAAAAAGAAGATTTTTATTTTAGATGATAAGGAACTTTACAAAAATAGAAT
AATTATAAAAAACAACACTTATTATCATCACTCTTTAGCTGATGATAATTTATTTTTGCCTAAAACTTATATAGAGCAAC
TAGATGAATTAAAAACATATGACATTGATTTATATAGAATAGCTAGAAGAGGTAGATTTGGAGTTAATGGTAGAAAAGTA
TTACCACAGTTTGAAAAGAAACCTCATTATGAAGTACTTCAAGCAATTCAAAATATTAAAAATTCTATTTATAGGGTTGG
TATGGACTTTGGATTTGAAACTTCATATAACGCTATAGTTAGATTAGCAATAGATGATGAGAATAAGATTTTATATATTT
ACTGGCAGTATTACAAGAACCAAATGACAGATGATAAAACAGCAATAGAAATAGCAGAATTTAAGAAAACACAGGAACTA
ATTAGATCAGACAGTGCAGAGCCTAAGACCATTAAATATTATAAACAAGAAGGATTTAATATGAGGGGTGCTAAAAAGTT
CCAAGGCAGTAGACTCCAAAACACTAAAAAGGTTAAGAGATTTAAAAAGATAATTTGTTCAGAAGATTGTCCAGATGTTA
TAGATGAACTAGAAGATTTAACTTATGCAGTAGATAAAAATGGTGAAATTATAGAAGATGAATTTAATATAGATCCTCAT
ACATTTAGTGCAATATGGTATGCATTAGATGGATATGAAGTTGCTGATATTAAAGAGAAAAAATATGATAATTCAGTATA
TGAAAAAGGAAAAGGAGTTGTTGCAAGAAATACAACTACTGATCCATACGGAAGGAAAGGAGGTACAGTATTTTAG

Upstream 100 bases:

>100_bases
AACAAAAACTAAGAATTGAAAAACTTAAAGCTGATATAAATAAAGATGATAACAAGGATAAACCAATAGAAATACTAATC
AAACGAAAGGGTAAGGATTA

Downstream 100 bases:

>100_bases
TGGAAAAACAAGCAAGAACTATAAGAGATACATTATTAAAGTTACCGGATAATGAAATAGCTGAAAGGAAACGTGTATTT
ACTGATTACTATTATTACAA

Product: phage terminase large subunit, pbsx family

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MLIVKEVNLHFENFIFDWNYKFYFLVGGYGSSKSYHVALKLILKLLEEKRTALVVREVYDTIRDSCFSLFDEIITEMELD
DRIKCVTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIIWIEECSEVKYAGFKELLGRLRHPTLELHMILSTNPVSKNN
WCYKHFFMDTKKKIFILDDKELYKNRIIIKNNTYYHHSLADDNLFLPKTYIEQLDELKTYDIDLYRIARRGRFGVNGRKV
LPQFEKKPHYEVLQAIQNIKNSIYRVGMDFGFETSYNAIVRLAIDDENKILYIYWQYYKNQMTDDKTAIEIAEFKKTQEL
IRSDSAEPKTIKYYKQEGFNMRGAKKFQGSRLQNTKKVKRFKKIICSEDCPDVIDELEDLTYAVDKNGEIIEDEFNIDPH
TFSAIWYALDGYEVADIKEKKYDNSVYEKGKGVVARNTTTDPYGRKGGTVF

Sequences:

>Translated_451_residues
MLIVKEVNLHFENFIFDWNYKFYFLVGGYGSSKSYHVALKLILKLLEEKRTALVVREVYDTIRDSCFSLFDEIITEMELD
DRIKCVTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIIWIEECSEVKYAGFKELLGRLRHPTLELHMILSTNPVSKNN
WCYKHFFMDTKKKIFILDDKELYKNRIIIKNNTYYHHSLADDNLFLPKTYIEQLDELKTYDIDLYRIARRGRFGVNGRKV
LPQFEKKPHYEVLQAIQNIKNSIYRVGMDFGFETSYNAIVRLAIDDENKILYIYWQYYKNQMTDDKTAIEIAEFKKTQEL
IRSDSAEPKTIKYYKQEGFNMRGAKKFQGSRLQNTKKVKRFKKIICSEDCPDVIDELEDLTYAVDKNGEIIEDEFNIDPH
TFSAIWYALDGYEVADIKEKKYDNSVYEKGKGVVARNTTTDPYGRKGGTVF
>Mature_451_residues
MLIVKEVNLHFENFIFDWNYKFYFLVGGYGSSKSYHVALKLILKLLEEKRTALVVREVYDTIRDSCFSLFDEIITEMELD
DRIKCVTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIIWIEECSEVKYAGFKELLGRLRHPTLELHMILSTNPVSKNN
WCYKHFFMDTKKKIFILDDKELYKNRIIIKNNTYYHHSLADDNLFLPKTYIEQLDELKTYDIDLYRIARRGRFGVNGRKV
LPQFEKKPHYEVLQAIQNIKNSIYRVGMDFGFETSYNAIVRLAIDDENKILYIYWQYYKNQMTDDKTAIEIAEFKKTQEL
IRSDSAEPKTIKYYKQEGFNMRGAKKFQGSRLQNTKKVKRFKKIICSEDCPDVIDELEDLTYAVDKNGEIIEDEFNIDPH
TFSAIWYALDGYEVADIKEKKYDNSVYEKGKGVVARNTTTDPYGRKGGTVF

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 53101; Mature: 53101

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVKEVNLHFENFIFDWNYKFYFLVGGYGSSKSYHVALKLILKLLEEKRTALVVREVYD
CEEEEEECEEEEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TIRDSCFSLFDEIITEMELDDRIKCVTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSII
HHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCEEEEECCCCCHHHCCCCCEEEE
WIEECSEVKYAGFKELLGRLRHPTLELHMILSTNPVSKNNWCYKHFFMDTKKKIFILDDK
EEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECH
ELYKNRIIIKNNTYYHHSLADDNLFLPKTYIEQLDELKTYDIDLYRIARRGRFGVNGRKV
HHHHCEEEEECCCEEEEECCCCCEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
LPQFEKKPHYEVLQAIQNIKNSIYRVGMDFGFETSYNAIVRLAIDDENKILYIYWQYYKN
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCC
QMTDDKTAIEIAEFKKTQELIRSDSAEPKTIKYYKQEGFNMRGAKKFQGSRLQNTKKVKR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
FKKIICSEDCPDVIDELEDLTYAVDKNGEIIEDEFNIDPHTFSAIWYALDGYEVADIKEK
HHHHHCCCCCHHHHHHHHHHEEEECCCCCEEECCCCCCCCHHEEEEEEECCEEEECCHHH
KYDNSVYEKGKGVVARNTTTDPYGRKGGTVF
HCCCHHHHCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MLIVKEVNLHFENFIFDWNYKFYFLVGGYGSSKSYHVALKLILKLLEEKRTALVVREVYD
CEEEEEECEEEEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TIRDSCFSLFDEIITEMELDDRIKCVTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSII
HHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCEEEEECCCCCHHHCCCCCEEEE
WIEECSEVKYAGFKELLGRLRHPTLELHMILSTNPVSKNNWCYKHFFMDTKKKIFILDDK
EEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECH
ELYKNRIIIKNNTYYHHSLADDNLFLPKTYIEQLDELKTYDIDLYRIARRGRFGVNGRKV
HHHHCEEEEECCCEEEEECCCCCEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
LPQFEKKPHYEVLQAIQNIKNSIYRVGMDFGFETSYNAIVRLAIDDENKILYIYWQYYKN
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCC
QMTDDKTAIEIAEFKKTQELIRSDSAEPKTIKYYKQEGFNMRGAKKFQGSRLQNTKKVKR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
FKKIICSEDCPDVIDELEDLTYAVDKNGEIIEDEFNIDPHTFSAIWYALDGYEVADIKEK
HHHHHCCCCCHHHHHHHHHHEEEECCCCCEEECCCCCCCCHHEEEEEEECCEEEECCHHH
KYDNSVYEKGKGVVARNTTTDPYGRKGGTVF
HCCCHHHHCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]