Click here to switch to the map view.

The map label for this gene is 226949570

Identifier: 226949570

GI number: 226949570

Start: 2571425

End: 2571877

Strand: Reverse

Name: 226949570

Synonym: CLM_2507

Alternate gene names: NA

Gene position: 2571877-2571425 (Counterclockwise)

Preceding gene: 226949571

Following gene: 226949569

Centisome position: 61.89

GC content: 29.14

Gene sequence:

>453_bases
ATGCCTAATTTATTCCCAGACAACTTAGAAGAAAATAATATAGAAGAATTAGAAGAACCTATTATAGATTTTAAAGGTTC
TTATTTATTTGACTTTAAAACAGGAGAGTTTGTTACTAATCCAGATGGAACTATAGCTAAGGCTAATGATTTAGAAGCTT
ATGTACAATGGTGTTATAAAGCTATGGCCACACCAAGATACAAATTAGCTTATTCAGATTTATATGGTCAGGAGTTTAAA
AATATTATTGGCCAAGATATTTCTAAAGATGCAATAGAACTAGAGATAAAGAGAATGACAGAAGAAACTCTTATGGTACA
TTCAAGGACTAAAGACGTTGATAATTTTATTTTTAAATGGTCTGAAAACAAAGAAGAAGTTTACTATGAGTTTGAAATTA
TAACTATAGATGAAGAAAAGTTTATGCTGCATAGTGAATTGAAAGTGTGGTGA

Upstream 100 bases:

>100_bases
AATTTTAAAACACCTAAAGAATTAAAATCATTAGGTCCAGGAGATAGAGTATTAGTTGCATTATTAAAAAATGAATTTGT
TGTAGTTGGGAGGGTTGTAA

Downstream 100 bases:

>100_bases
TATGATTGGAAAGGGATTTACTTATTCCAGAGTTTTTACAGGAAGATGCTAGTACCATACATGAAAGAATGTTAGAAAAA
GCACCGCCTAATGTGTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPNLFPDNLEENNIEELEEPIIDFKGSYLFDFKTGEFVTNPDGTIAKANDLEAYVQWCYKAMATPRYKLAYSDLYGQEFK
NIIGQDISKDAIELEIKRMTEETLMVHSRTKDVDNFIFKWSENKEEVYYEFEIITIDEEKFMLHSELKVW

Sequences:

>Translated_150_residues
MPNLFPDNLEENNIEELEEPIIDFKGSYLFDFKTGEFVTNPDGTIAKANDLEAYVQWCYKAMATPRYKLAYSDLYGQEFK
NIIGQDISKDAIELEIKRMTEETLMVHSRTKDVDNFIFKWSENKEEVYYEFEIITIDEEKFMLHSELKVW
>Mature_149_residues
PNLFPDNLEENNIEELEEPIIDFKGSYLFDFKTGEFVTNPDGTIAKANDLEAYVQWCYKAMATPRYKLAYSDLYGQEFKN
IIGQDISKDAIELEIKRMTEETLMVHSRTKDVDNFIFKWSENKEEVYYEFEIITIDEEKFMLHSELKVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17821; Mature: 17690

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLFPDNLEENNIEELEEPIIDFKGSYLFDFKTGEFVTNPDGTIAKANDLEAYVQWCYK
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECCCCCEEECHHHHHHHHHHHH
AMATPRYKLAYSDLYGQEFKNIIGQDISKDAIELEIKRMTEETLMVHSRTKDVDNFIFKW
HHCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEE
SENKEEVYYEFEIITIDEEKFMLHSELKVW
CCCCCEEEEEEEEEEECCHHEEECCCEECC
>Mature Secondary Structure 
PNLFPDNLEENNIEELEEPIIDFKGSYLFDFKTGEFVTNPDGTIAKANDLEAYVQWCYK
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEECCCCCEEECHHHHHHHHHHHH
AMATPRYKLAYSDLYGQEFKNIIGQDISKDAIELEIKRMTEETLMVHSRTKDVDNFIFKW
HHCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEE
SENKEEVYYEFEIITIDEEKFMLHSELKVW
CCCCCEEEEEEEEEEECCHHEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA