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The map label for this gene is yqbT [H]

Identifier: 226949569

GI number: 226949569

Start: 2570289

End: 2571419

Strand: Reverse

Name: yqbT [H]

Synonym: CLM_2506

Alternate gene names: 226949569

Gene position: 2571419-2570289 (Counterclockwise)

Preceding gene: 226949570

Following gene: 226949568

Centisome position: 61.88

GC content: 31.12

Gene sequence:

>1131_bases
TTGGAAAGGGATTTACTTATTCCAGAGTTTTTACAGGAAGATGCTAGTACCATACATGAAAGAATGTTAGAAAAAGCACC
GCCTAATGTGTCTACCATTGAAGGAGATTTCTATTGGGATAATACAAGACCTACCGCAGAGGAAAAAGCAAGTTTAATGC
AAGTTCAATTACAGAATATGTTAAGGTTAGCATTTCCACAAACTAGTTACGGTGTGTGGCTTGAATACTTAGGAGAATGT
AAAGGTGTATTTAAAAACCTTCCTACTAAATCTATAGGAGTTATAAAAGTTATAGGAAGAAAAGGTACTAATATATACAA
AGATAAATTAATAGGAACTATAGCAACAGATGATTCTGAATCTGTTGTTTTTAAGTTTACAGAGAATAAAGTTATTGATG
AAACAGGAGTGGCTTATGTTAAAGCTGAATGTACTAAGGCAGGTACTATAGGAAATGTACTAAAAAACACTATAACCGTA
CTTATGGATCGTATTAATGGTATAGAAAGTATTACAAATGAAGAGGAGTTCACAGGTGGAACTGATTTAGAAGATGAAGA
ACATTATAGGGAACGAGTTTTAGAAGAATATAAAAATGAAGCTACAAGTGGTAATAATGAACATTATAAAAAATGGGCTA
AGGAAGTAGACGGTGTTGGTTATGCATATGTAATAGAAGAATGGAATGGTCCTGGTACAGTTAAAGTATTAATATTAGAT
AAAAATAATAAAACTGCTACAAAAGAACTTATAGATAAAGTGCAAAATTATATATATGAAATAGTACCAAAAGAAGAGAA
TAGGGGAGGGAAAGCTCCTATAGGTGCTATTGCAACAATAGATACTCCAATTACTTTAGTTATTGATATAAAAGCTAATT
TTAAATTTAAAGAAGATTTTAATTCTGAGGTAGTGTTAAACAGTTTAAAAGAAAATTTAAGCAAGTATTTATCTGGAATA
CCTATAGGAGGAACTATACTTTACACTGCAATTCACACTATAGTTGGATCTATGATTCTTACGGGGGAAGGAATAGAAGA
TTTTAAAAACTTAACTGTAAATGGGATTACCGAGAATATTAAACTTATAGATCAAGTAGCTGTAATAGGTGAGGTGACTA
ACATACAATGA

Upstream 100 bases:

>100_bases
GGTCTGAAAACAAAGAAGAAGTTTACTATGAGTTTGAAATTATAACTATAGATGAAGAAAAGTTTATGCTGCATAGTGAA
TTGAAAGTGTGGTGATATGA

Downstream 100 bases:

>100_bases
TAAAGTCCAAAAAAGGAAAAGAAATGATAACATATGTTTCACCTATTTATGAACAAAGTAAAGTGATACAATCTATTTTT
GAGGCTATAGGCTATGAATG

Product: putative baseplate J-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MERDLLIPEFLQEDASTIHERMLEKAPPNVSTIEGDFYWDNTRPTAEEKASLMQVQLQNMLRLAFPQTSYGVWLEYLGEC
KGVFKNLPTKSIGVIKVIGRKGTNIYKDKLIGTIATDDSESVVFKFTENKVIDETGVAYVKAECTKAGTIGNVLKNTITV
LMDRINGIESITNEEEFTGGTDLEDEEHYRERVLEEYKNEATSGNNEHYKKWAKEVDGVGYAYVIEEWNGPGTVKVLILD
KNNKTATKELIDKVQNYIYEIVPKEENRGGKAPIGAIATIDTPITLVIDIKANFKFKEDFNSEVVLNSLKENLSKYLSGI
PIGGTILYTAIHTIVGSMILTGEGIEDFKNLTVNGITENIKLIDQVAVIGEVTNIQ

Sequences:

>Translated_376_residues
MERDLLIPEFLQEDASTIHERMLEKAPPNVSTIEGDFYWDNTRPTAEEKASLMQVQLQNMLRLAFPQTSYGVWLEYLGEC
KGVFKNLPTKSIGVIKVIGRKGTNIYKDKLIGTIATDDSESVVFKFTENKVIDETGVAYVKAECTKAGTIGNVLKNTITV
LMDRINGIESITNEEEFTGGTDLEDEEHYRERVLEEYKNEATSGNNEHYKKWAKEVDGVGYAYVIEEWNGPGTVKVLILD
KNNKTATKELIDKVQNYIYEIVPKEENRGGKAPIGAIATIDTPITLVIDIKANFKFKEDFNSEVVLNSLKENLSKYLSGI
PIGGTILYTAIHTIVGSMILTGEGIEDFKNLTVNGITENIKLIDQVAVIGEVTNIQ
>Mature_376_residues
MERDLLIPEFLQEDASTIHERMLEKAPPNVSTIEGDFYWDNTRPTAEEKASLMQVQLQNMLRLAFPQTSYGVWLEYLGEC
KGVFKNLPTKSIGVIKVIGRKGTNIYKDKLIGTIATDDSESVVFKFTENKVIDETGVAYVKAECTKAGTIGNVLKNTITV
LMDRINGIESITNEEEFTGGTDLEDEEHYRERVLEEYKNEATSGNNEHYKKWAKEVDGVGYAYVIEEWNGPGTVKVLILD
KNNKTATKELIDKVQNYIYEIVPKEENRGGKAPIGAIATIDTPITLVIDIKANFKFKEDFNSEVVLNSLKENLSKYLSGI
PIGGTILYTAIHTIVGSMILTGEGIEDFKNLTVNGITENIKLIDQVAVIGEVTNIQ

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 41987; Mature: 41987

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDLLIPEFLQEDASTIHERMLEKAPPNVSTIEGDFYWDNTRPTAEEKASLMQVQLQNM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHH
LRLAFPQTSYGVWLEYLGECKGVFKNLPTKSIGVIKVIGRKGTNIYKDKLIGTIATDDSE
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHEEEEECCCCC
SVVFKFTENKVIDETGVAYVKAECTKAGTIGNVLKNTITVLMDRINGIESITNEEEFTGG
CEEEEEECCCEECCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
TDLEDEEHYRERVLEEYKNEATSGNNEHYKKWAKEVDGVGYAYVIEEWNGPGTVKVLILD
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEE
KNNKTATKELIDKVQNYIYEIVPKEENRGGKAPIGAIATIDTPITLVIDIKANFKFKEDF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECEEECCCC
NSEVVLNSLKENLSKYLSGIPIGGTILYTAIHTIVGSMILTGEGIEDFKNLTVNGITENI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCEECCHHHHH
KLIDQVAVIGEVTNIQ
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERDLLIPEFLQEDASTIHERMLEKAPPNVSTIEGDFYWDNTRPTAEEKASLMQVQLQNM
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHHHH
LRLAFPQTSYGVWLEYLGECKGVFKNLPTKSIGVIKVIGRKGTNIYKDKLIGTIATDDSE
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHEEEEECCCCC
SVVFKFTENKVIDETGVAYVKAECTKAGTIGNVLKNTITVLMDRINGIESITNEEEFTGG
CEEEEEECCCEECCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
TDLEDEEHYRERVLEEYKNEATSGNNEHYKKWAKEVDGVGYAYVIEEWNGPGTVKVLILD
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEE
KNNKTATKELIDKVQNYIYEIVPKEENRGGKAPIGAIATIDTPITLVIDIKANFKFKEDF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECEEECCCC
NSEVVLNSLKENLSKYLSGIPIGGTILYTAIHTIVGSMILTGEGIEDFKNLTVNGITENI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCEECCHHHHH
KLIDQVAVIGEVTNIQ
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]