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The map label for this gene is ysdA [H]

Identifier: 226949520

GI number: 226949520

Start: 2538002

End: 2538307

Strand: Reverse

Name: ysdA [H]

Synonym: CLM_2455

Alternate gene names: 226949520

Gene position: 2538307-2538002 (Counterclockwise)

Preceding gene: 226949524

Following gene: 226949519

Centisome position: 61.09

GC content: 21.57

Gene sequence:

>306_bases
ATGAATTCTATAATTTGTTTAAAAGAAAAGAGAGAAGTTATGATTAAATATTTTAAGTATTATTTTATAGTATTAAATTT
ATTGGGTTTTTTATGTATGTATATAGATAAAGAAAAGGCTAAAGCAAATAAATGGAGAATAAAGGAGAATACTTTATTGT
TAATAGCCTTACTAGGCGGCAGTATAGGATCCTATGTGGGAATGAAAATATTTAGGCATAAGACTAAACATTTTAAATTT
AAATATGGAATTCCTTTTATAATATTAATTCAACTATGTATATTTTTATATATGAGTAAATTATAA

Upstream 100 bases:

>100_bases
TAATTTTAATTTTGTAGTAAATATGGGGTATAAGTCTAAAATGATTGCTGATATAATAAAAACAGATTATGGGCTAGAAT
GAAAAGTAGAATTATAAAAG

Downstream 100 bases:

>100_bases
TATTTCAGCATTATATCATTTTATAGGAGGTATCGAAATTTTACTTTAATTTAATGGATATAAAACAGTGAAAATATGGA
AGCTTTATGATAAAGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNSIICLKEKREVMIKYFKYYFIVLNLLGFLCMYIDKEKAKANKWRIKENTLLLIALLGGSIGSYVGMKIFRHKTKHFKF
KYGIPFIILIQLCIFLYMSKL

Sequences:

>Translated_101_residues
MNSIICLKEKREVMIKYFKYYFIVLNLLGFLCMYIDKEKAKANKWRIKENTLLLIALLGGSIGSYVGMKIFRHKTKHFKF
KYGIPFIILIQLCIFLYMSKL
>Mature_101_residues
MNSIICLKEKREVMIKYFKYYFIVLNLLGFLCMYIDKEKAKANKWRIKENTLLLIALLGGSIGSYVGMKIFRHKTKHFKF
KYGIPFIILIQLCIFLYMSKL

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 12040; Mature: 12040

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIICLKEKREVMIKYFKYYFIVLNLLGFLCMYIDKEKAKANKWRIKENTLLLIALLGG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCC
SIGSYVGMKIFRHKTKHFKFKYGIPFIILIQLCIFLYMSKL
CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSIICLKEKREVMIKYFKYYFIVLNLLGFLCMYIDKEKAKANKWRIKENTLLLIALLGG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCC
SIGSYVGMKIFRHKTKHFKFKYGIPFIILIQLCIFLYMSKL
CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]