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The map label for this gene is 226949493

Identifier: 226949493

GI number: 226949493

Start: 2509760

End: 2510590

Strand: Reverse

Name: 226949493

Synonym: CLM_2428

Alternate gene names: NA

Gene position: 2510590-2509760 (Counterclockwise)

Preceding gene: 226949494

Following gene: 226949492

Centisome position: 60.42

GC content: 30.08

Gene sequence:

>831_bases
TTGAATATAGCAGTACTTAGTGGAAAGGGAGGAACGGGTAAAACTACAGTATCTACAAATCTTGCCCTTGCATTAAAGTC
TAACTATATAGACTGTGATGTGGAAGAACCAAATGGTTTTTTATTTTTAAAACCTAAAGTAGAAACAGAAAAAAAGGTTA
TGGTGGAGTATCCAATTATAGATGATAATAAATGTGTTAATTGTGGAGCTTGTGCTAATGCTTGTCAGTTTAATGCACTT
GCAAAGATTAAGGACGATATTATGCTTTTTCAAAAATTATGTCATGGTTGTGGAGCCTGTAAAATTGCCTGTAAATATAA
TGCTATAACTTATGATAAAAGAGAGATAGGCAAAATTGAAATCGGATATAGCCATAATATAAATTGTAGCAGAGGAATTT
TAAATATAAGTGAACCTATGGCAGTACCTGTTATTAAAGAATTACTTAAAAATTTATCCAGTAAGAGTAATTTAATTGAT
TGTCCTCCTGGAACTTCCTGTAATGTAATAAATGCTCTAAAGTATGCTAATAGAGCAATACTTGTTACAGAACCTTCAGA
ATTTGGGCTTCACGATTTAAAAATGGCTGTAGAACTTGTAAAAATGTATAATATACCTTTTGGTATAGTTATAAATAAAG
ATGATGAAGAAGATAACATAATAAAAAAATATTGCAAAGAAGAAGAAATAAATTTGATAGGTACTATACCCTATGCTAAA
AAAACTGCAGCTCTTTATTCTAAAGGAGAAATACTTTATGATAGCTCATATCATAAAGCAGTATTTGATAATCTTTCTAA
GAAAGCCAAGGAGGTGCTAAATTGGATTTAG

Upstream 100 bases:

>100_bases
TTTAGTAATTGAAAAATATAATAAGGGTGAGCTTGAACAAATAAGCATGTCTGGCCCTGCACATCATGGAATTTAATAGC
AGAATGGAGATGAATATATA

Downstream 100 bases:

>100_bases
TGGTTTTAAGTGGAAAAGGTGGAACAGGTAAAACTACAATAGCAACAGCACTATCAGAGCTTTATAATGATGTAATAAGA
GTAGATTGTGATGTGGATGC

Product: CobQ/CobB/MinD/ParA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNIAVLSGKGGTGKTTVSTNLALALKSNYIDCDVEEPNGFLFLKPKVETEKKVMVEYPIIDDNKCVNCGACANACQFNAL
AKIKDDIMLFQKLCHGCGACKIACKYNAITYDKREIGKIEIGYSHNINCSRGILNISEPMAVPVIKELLKNLSSKSNLID
CPPGTSCNVINALKYANRAILVTEPSEFGLHDLKMAVELVKMYNIPFGIVINKDDEEDNIIKKYCKEEEINLIGTIPYAK
KTAALYSKGEILYDSSYHKAVFDNLSKKAKEVLNWI

Sequences:

>Translated_276_residues
MNIAVLSGKGGTGKTTVSTNLALALKSNYIDCDVEEPNGFLFLKPKVETEKKVMVEYPIIDDNKCVNCGACANACQFNAL
AKIKDDIMLFQKLCHGCGACKIACKYNAITYDKREIGKIEIGYSHNINCSRGILNISEPMAVPVIKELLKNLSSKSNLID
CPPGTSCNVINALKYANRAILVTEPSEFGLHDLKMAVELVKMYNIPFGIVINKDDEEDNIIKKYCKEEEINLIGTIPYAK
KTAALYSKGEILYDSSYHKAVFDNLSKKAKEVLNWI
>Mature_276_residues
MNIAVLSGKGGTGKTTVSTNLALALKSNYIDCDVEEPNGFLFLKPKVETEKKVMVEYPIIDDNKCVNCGACANACQFNAL
AKIKDDIMLFQKLCHGCGACKIACKYNAITYDKREIGKIEIGYSHNINCSRGILNISEPMAVPVIKELLKNLSSKSNLID
CPPGTSCNVINALKYANRAILVTEPSEFGLHDLKMAVELVKMYNIPFGIVINKDDEEDNIIKKYCKEEEINLIGTIPYAK
KTAALYSKGEILYDSSYHKAVFDNLSKKAKEVLNWI

Specific function: Unknown

COG id: COG1149

COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0578 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 30549; Mature: 30549

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAVLSGKGGTGKTTVSTNLALALKSNYIDCDVEEPNGFLFLKPKVETEKKVMVEYPII
CEEEEEECCCCCCCEEEECEEEEEEECCEEEEEEECCCCEEEECCCCCCCCEEEEEECEE
DDNKCVNCGACANACQFNALAKIKDDIMLFQKLCHGCGACKIACKYNAITYDKREIGKIE
CCCCEEECCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCHHCCEEE
IGYSHNINCSRGILNISEPMAVPVIKELLKNLSSKSNLIDCPPGTSCNVINALKYANRAI
ECCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCEE
LVTEPSEFGLHDLKMAVELVKMYNIPFGIVINKDDEEDNIIKKYCKEEEINLIGTIPYAK
EEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEECCCCH
KTAALYSKGEILYDSSYHKAVFDNLSKKAKEVLNWI
HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIAVLSGKGGTGKTTVSTNLALALKSNYIDCDVEEPNGFLFLKPKVETEKKVMVEYPII
CEEEEEECCCCCCCEEEECEEEEEEECCEEEEEEECCCCEEEECCCCCCCCEEEEEECEE
DDNKCVNCGACANACQFNALAKIKDDIMLFQKLCHGCGACKIACKYNAITYDKREIGKIE
CCCCEEECCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCHHCCEEE
IGYSHNINCSRGILNISEPMAVPVIKELLKNLSSKSNLIDCPPGTSCNVINALKYANRAI
ECCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCEE
LVTEPSEFGLHDLKMAVELVKMYNIPFGIVINKDDEEDNIIKKYCKEEEINLIGTIPYAK
EEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEECCCCH
KTAALYSKGEILYDSSYHKAVFDNLSKKAKEVLNWI
HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]