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The map label for this gene is 226949492

Identifier: 226949492

GI number: 226949492

Start: 2508924

End: 2509769

Strand: Reverse

Name: 226949492

Synonym: CLM_2427

Alternate gene names: NA

Gene position: 2509769-2508924 (Counterclockwise)

Preceding gene: 226949493

Following gene: 226949491

Centisome position: 60.4

GC content: 29.2

Gene sequence:

>846_bases
TTGGATTTAGTGGTTTTAAGTGGAAAAGGTGGAACAGGTAAAACTACAATAGCAACAGCACTATCAGAGCTTTATAATGA
TGTAATAAGAGTAGATTGTGATGTGGATGCTTCTAATTTTTATATGTTTTACAAAGGAAAAGATATTGAGAAAAGTGATT
TTATAGGTGGTAAAAAAGCTAGTATAGATGAGGATATTTGTATTAAATGTACGGAATGTGAATTAGTCTGTAAATTTGAT
GCTATAGAAAATTTTAAGATAGATCCTTTTCTTTGTGAGGGGTGTGGTGCTTGTACATTAATATGCCCACAAAATGCCAT
AAAATTAGAAGATGAAAAAACTGCAAAGACTTTTATTACAGAATTAGATAAAGGATTAATTTCTAGAGCAGAAATGGAAG
TAGGCAGTGATGGTTCAGGAAAATTAGTAACTGATCTAAGAAAAAAGGCTAAAAAATTAAATAAAGATGATAAATTAACA
ATAATAGATGGTTCTCCTGGCATTGGATGTGCTGTTATAGCTTCTATAACAGGAGCTGATGCAGTACTTATTGTTACAGA
ACCTACTGCATCAGGACTTGAAGATTTAAAACGAGTAGTAGATTTATGTAAGCATTTTGGGGTTTTTACTATGGTTTGTG
TAAACAAATATGATATAAATAAAGAAATGACAGTAGATATAGAAAGTTTTATTAATGAAAAAGGTATAAAATTAGTAGGT
AAAATTCCCTATGATAATACTGTTATGAAATCTATAAATGAGCTAAACCCTATAACTTATTATAAAGAAAGTATAGCTAA
AGAAGCTATTGAACATATGTGGAAAAGCATTAAAGAAACAATATAA

Upstream 100 bases:

>100_bases
AAACTGCAGCTCTTTATTCTAAAGGAGAAATACTTTATGATAGCTCATATCATAAAGCAGTATTTGATAATCTTTCTAAG
AAAGCCAAGGAGGTGCTAAA

Downstream 100 bases:

>100_bases
ATTGAAAAGGATATACAAAGATTAAATGAATAGGTATCTTACAGTTATATATAGAAAAAAATTATTATTAAATTAAAATA
TAGGAGGAATTTTAAATGAA

Product: CobQ/CobB/MinD/ParA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDLVVLSGKGGTGKTTIATALSELYNDVIRVDCDVDASNFYMFYKGKDIEKSDFIGGKKASIDEDICIKCTECELVCKFD
AIENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTFITELDKGLISRAEMEVGSDGSGKLVTDLRKKAKKLNKDDKLT
IIDGSPGIGCAVIASITGADAVLIVTEPTASGLEDLKRVVDLCKHFGVFTMVCVNKYDINKEMTVDIESFINEKGIKLVG
KIPYDNTVMKSINELNPITYYKESIAKEAIEHMWKSIKETI

Sequences:

>Translated_281_residues
MDLVVLSGKGGTGKTTIATALSELYNDVIRVDCDVDASNFYMFYKGKDIEKSDFIGGKKASIDEDICIKCTECELVCKFD
AIENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTFITELDKGLISRAEMEVGSDGSGKLVTDLRKKAKKLNKDDKLT
IIDGSPGIGCAVIASITGADAVLIVTEPTASGLEDLKRVVDLCKHFGVFTMVCVNKYDINKEMTVDIESFINEKGIKLVG
KIPYDNTVMKSINELNPITYYKESIAKEAIEHMWKSIKETI
>Mature_281_residues
MDLVVLSGKGGTGKTTIATALSELYNDVIRVDCDVDASNFYMFYKGKDIEKSDFIGGKKASIDEDICIKCTECELVCKFD
AIENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTFITELDKGLISRAEMEVGSDGSGKLVTDLRKKAKKLNKDDKLT
IIDGSPGIGCAVIASITGADAVLIVTEPTASGLEDLKRVVDLCKHFGVFTMVCVNKYDINKEMTVDIESFINEKGIKLVG
KIPYDNTVMKSINELNPITYYKESIAKEAIEHMWKSIKETI

Specific function: Unknown

COG id: COG1149

COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 30847; Mature: 30847

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVVLSGKGGTGKTTIATALSELYNDVIRVDCDVDASNFYMFYKGKDIEKSDFIGGKKA
CCEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCHHHCCCCCCC
SIDEDICIKCTECELVCKFDAIENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTFIT
CCCCCCEEEEECCEEEEEECCCCCCCCCCHHCCCCCEEEEECCCCCEECCCHHHHHHHHH
ELDKGLISRAEMEVGSDGSGKLVTDLRKKAKKLNKDDKLTIIDGSPGIGCAVIASITGAD
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCC
AVLIVTEPTASGLEDLKRVVDLCKHFGVFTMVCVNKYDINKEMTVDIESFINEKGIKLVG
EEEEEECCCCCCHHHHHHHHHHHHHCCHHEEEEEHHCCCCCCEEEEHHHHCCCCCCEEEE
KIPYDNTVMKSINELNPITYYKESIAKEAIEHMWKSIKETI
ECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLVVLSGKGGTGKTTIATALSELYNDVIRVDCDVDASNFYMFYKGKDIEKSDFIGGKKA
CCEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCHHHCCCCCCC
SIDEDICIKCTECELVCKFDAIENFKIDPFLCEGCGACTLICPQNAIKLEDEKTAKTFIT
CCCCCCEEEEECCEEEEEECCCCCCCCCCHHCCCCCEEEEECCCCCEECCCHHHHHHHHH
ELDKGLISRAEMEVGSDGSGKLVTDLRKKAKKLNKDDKLTIIDGSPGIGCAVIASITGAD
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCC
AVLIVTEPTASGLEDLKRVVDLCKHFGVFTMVCVNKYDINKEMTVDIESFINEKGIKLVG
EEEEEECCCCCCHHHHHHHHHHHHHCCHHEEEEEHHCCCCCCEEEEHHHHCCCCCCEEEE
KIPYDNTVMKSINELNPITYYKESIAKEAIEHMWKSIKETI
ECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]