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The map label for this gene is ygbK [C]

Identifier: 226949477

GI number: 226949477

Start: 2492087

End: 2493424

Strand: Reverse

Name: ygbK [C]

Synonym: CLM_2410

Alternate gene names: 226949477

Gene position: 2493424-2492087 (Counterclockwise)

Preceding gene: 226949478

Following gene: 226949476

Centisome position: 60.01

GC content: 29.37

Gene sequence:

>1338_bases
ATGTTAAATTATGTTATTATAGCTGACGATTTGACGGGAGCTAATGCTACAGGAGTTTTAATTAAAAAATTAAGATTAAA
ACCTGTAACGCTAATGAATTCTTTAAGAAAAGATGATTTAGAAAAATCCTACGATACAGTTCTTTATTCAACAGATAGTA
GAGGGGTGGAAAAAGAAGACGCTTATGAAAGAGTTTATCAAGCTACAGAATTTTTCTTTAGTCCAAATGTAAAAGTTTAC
GGAAAAAGAATAGATAGTACTTTAAGAGGAAACATTGGATCCGAGATAGACGGAATGTTAGATGCACTTCCAAAAGGTAC
CATAGCTGCTGTAGTACCAGCTTTCCCAGAGGCAAACAGACAAGCCGTAGGAGGATATCTCTTAGTAAATGGTAAGGCTT
TAGAAGATTCAGATGCAGCAAAGGATGGTAAGAAACCTATAAACTCTTCCATAATTGAAAAATTAGTAAAAGAGCAAAGT
AAATATGAAGCCGCATCTCTATATATTGAAGATATTAAAAAGGGATGTGAAAATTTACAAAACAAAATATCAAAGTTCTA
TGATGAGGGAAAAAAATTAATAATATTTGATGCTTTAGATAACAATGATTTAGAAATTATATCAAAAGCATTAATAAATA
CAAATATTAAGTTTATATCTGTAGATCCAGGTCCTTTTACTGCAGAGGTAATAAAGCAACATATTGTTTTAGATAAGAAG
AGTAAAAAGAAGCAGGAAATTAAAAAGGATAGAGAGATTAATAATAAGGTTCTTATGGCTATAGGAAGTATAACAGACAC
TACTAGAGAACAATTAGAAAGGCTTTCAAAGGATAGAGACATATTTAAGGTAGATATAAATTCTAGAGCTATATTAGGTG
ATATAAATATAAAACACAAAGAAATAGACAGAGTAATAAATAAGGTTATAGAAAATAAAGATTTATATGATGTATTTTGT
GTAGTACTAGATTCTTTATATGAAGAAGTAAGGATTAATTTAGATGAGGAAGCAAAAAAACAAAATACCACAAAAGAATT
TTTATCTCAAATAATGAATACTTCAGTAGCGGAAATAAGTTATAGAATAATGAAAGAAATAAAATCTATAAAAGGAATAT
TTAGTAGTGGAGGAGATATAAGCGTTAGTATTTGTAGAAAATTTAATTCAGCAGGACTAGAACTTTTAGATGAAGTAATG
CCTTTAGCCGCTTATGGCAAGTTTATAGAAGGAGAATTCCCAGATATGAAAATTGTAAGCAAAGGGGGAATGGTAGGAAA
AGAAGATGGAATGGAGTTATGTGTAGATTATTTATTTAAAAATATTAATTGTGACTAG

Upstream 100 bases:

>100_bases
TTAGAATCATTAAATGTAAAAATAATCAATGTATAAATAGGAATTTTATTCAATGAATCCTATGAAGTTTAGCAAATGAT
TGGTTCGAGGGGGACATTAA

Downstream 100 bases:

>100_bases
GGAGGACTAAATATGATTAATAATAAACCAATAATAGGAATACCTATAGGAGATCCAGCAGGTGTAGGGCCAGAAATAGT
AGTAAAATCATTAACTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MLNYVIIADDLTGANATGVLIKKLRLKPVTLMNSLRKDDLEKSYDTVLYSTDSRGVEKEDAYERVYQATEFFFSPNVKVY
GKRIDSTLRGNIGSEIDGMLDALPKGTIAAVVPAFPEANRQAVGGYLLVNGKALEDSDAAKDGKKPINSSIIEKLVKEQS
KYEAASLYIEDIKKGCENLQNKISKFYDEGKKLIIFDALDNNDLEIISKALINTNIKFISVDPGPFTAEVIKQHIVLDKK
SKKKQEIKKDREINNKVLMAIGSITDTTREQLERLSKDRDIFKVDINSRAILGDINIKHKEIDRVINKVIENKDLYDVFC
VVLDSLYEEVRINLDEEAKKQNTTKEFLSQIMNTSVAEISYRIMKEIKSIKGIFSSGGDISVSICRKFNSAGLELLDEVM
PLAAYGKFIEGEFPDMKIVSKGGMVGKEDGMELCVDYLFKNINCD

Sequences:

>Translated_445_residues
MLNYVIIADDLTGANATGVLIKKLRLKPVTLMNSLRKDDLEKSYDTVLYSTDSRGVEKEDAYERVYQATEFFFSPNVKVY
GKRIDSTLRGNIGSEIDGMLDALPKGTIAAVVPAFPEANRQAVGGYLLVNGKALEDSDAAKDGKKPINSSIIEKLVKEQS
KYEAASLYIEDIKKGCENLQNKISKFYDEGKKLIIFDALDNNDLEIISKALINTNIKFISVDPGPFTAEVIKQHIVLDKK
SKKKQEIKKDREINNKVLMAIGSITDTTREQLERLSKDRDIFKVDINSRAILGDINIKHKEIDRVINKVIENKDLYDVFC
VVLDSLYEEVRINLDEEAKKQNTTKEFLSQIMNTSVAEISYRIMKEIKSIKGIFSSGGDISVSICRKFNSAGLELLDEVM
PLAAYGKFIEGEFPDMKIVSKGGMVGKEDGMELCVDYLFKNINCD
>Mature_445_residues
MLNYVIIADDLTGANATGVLIKKLRLKPVTLMNSLRKDDLEKSYDTVLYSTDSRGVEKEDAYERVYQATEFFFSPNVKVY
GKRIDSTLRGNIGSEIDGMLDALPKGTIAAVVPAFPEANRQAVGGYLLVNGKALEDSDAAKDGKKPINSSIIEKLVKEQS
KYEAASLYIEDIKKGCENLQNKISKFYDEGKKLIIFDALDNNDLEIISKALINTNIKFISVDPGPFTAEVIKQHIVLDKK
SKKKQEIKKDREINNKVLMAIGSITDTTREQLERLSKDRDIFKVDINSRAILGDINIKHKEIDRVINKVIENKDLYDVFC
VVLDSLYEEVRINLDEEAKKQNTTKEFLSQIMNTSVAEISYRIMKEIKSIKGIFSSGGDISVSICRKFNSAGLELLDEVM
PLAAYGKFIEGEFPDMKIVSKGGMVGKEDGMELCVDYLFKNINCD

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=290, Percent_Identity=23.1034482758621, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 49925; Mature: 49925

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYVIIADDLTGANATGVLIKKLRLKPVTLMNSLRKDDLEKSYDTVLYSTDSRGVEKED
CCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHH
AYERVYQATEFFFSPNVKVYGKRIDSTLRGNIGSEIDGMLDALPKGTIAAVVPAFPEANR
HHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC
QAVGGYLLVNGKALEDSDAAKDGKKPINSSIIEKLVKEQSKYEAASLYIEDIKKGCENLQ
HHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKISKFYDEGKKLIIFDALDNNDLEIISKALINTNIKFISVDPGPFTAEVIKQHIVLDKK
HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCH
SKKKQEIKKDREINNKVLMAIGSITDTTREQLERLSKDRDIFKVDINSRAILGDINIKHK
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCHH
EIDRVINKVIENKDLYDVFCVVLDSLYEEVRINLDEEAKKQNTTKEFLSQIMNTSVAEIS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCHHHHHH
YRIMKEIKSIKGIFSSGGDISVSICRKFNSAGLELLDEVMPLAAYGKFIEGEFPDMKIVS
HHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
KGGMVGKEDGMELCVDYLFKNINCD
CCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNYVIIADDLTGANATGVLIKKLRLKPVTLMNSLRKDDLEKSYDTVLYSTDSRGVEKED
CCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHH
AYERVYQATEFFFSPNVKVYGKRIDSTLRGNIGSEIDGMLDALPKGTIAAVVPAFPEANR
HHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC
QAVGGYLLVNGKALEDSDAAKDGKKPINSSIIEKLVKEQSKYEAASLYIEDIKKGCENLQ
HHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKISKFYDEGKKLIIFDALDNNDLEIISKALINTNIKFISVDPGPFTAEVIKQHIVLDKK
HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCH
SKKKQEIKKDREINNKVLMAIGSITDTTREQLERLSKDRDIFKVDINSRAILGDINIKHK
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCHH
EIDRVINKVIENKDLYDVFCVVLDSLYEEVRINLDEEAKKQNTTKEFLSQIMNTSVAEIS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCHHHHHH
YRIMKEIKSIKGIFSSGGDISVSICRKFNSAGLELLDEVMPLAAYGKFIEGEFPDMKIVS
HHHHHHHHHHHHHHCCCCCEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
KGGMVGKEDGMELCVDYLFKNINCD
CCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]