Click here to switch to the map view.

The map label for this gene is 226949472

Identifier: 226949472

GI number: 226949472

Start: 2486920

End: 2487519

Strand: Reverse

Name: 226949472

Synonym: CLM_2405

Alternate gene names: NA

Gene position: 2487519-2486920 (Counterclockwise)

Preceding gene: 226949473

Following gene: 226949471

Centisome position: 59.86

GC content: 29.67

Gene sequence:

>600_bases
ATGAAAAAAGATTTTTATGAAGCAATAAAAGAAAGACGTACATTTTATGGAATTAGTAAAGAAGCATTAGTTTCAGATGA
TAGAATTAAGGAAGTTATTGAGCATGCAGTAAAGCATACACCTTCTGCCTTTAACTCTCAAAGTGCAAGAGTAGTGCTAT
TGTTAGGAGATAAGCATGATAAACTATGGAGTATTACAAAAGAAGCTTTAAGAAAGATAGTACCTGAAGATAAATTTGGA
AGTACTGAAGAAAAAATAAATTCTTTTGCTAGTGGGTATGGAACAATTTTATATTTTGAAGATATGAGTGTAGTAGAAGA
TCTTCAAAAACAATTTTCTTTATACAAAGACAATTTCCCAATATGGTCTCAACAATCTAGTGGAATGCTTCAATTTGTTA
TATGGACATCATTAGAAATAGAAGGTTTTGGAGCTTCATTGCAACATTATAATGAACTTATTGAAGAAGATGTTAAAAAG
GAATGGAATATACCAAACAACTGGAAACTTATAGCTCAAATGCCTTTTGGTAAACCAGTGGTAAAGCCAGATGAAAAACA
ATATAAACCATTAGAAGAACGTATTAAAATAATTAAATAG

Upstream 100 bases:

>100_bases
AAATTATGATTTTGGATATTCTAATGTACGATAGTATAAAAAATATAATTATATTTTAATGGTAAAAATATAATTATATA
TGAAATTGGAGGAGTTAATA

Downstream 100 bases:

>100_bases
TTAAAATAATAATATAATTAAGCTCTCACATTGTGGGAGCTTAATTATATTAGCATTTAAAATATTCTTGAAGTAAGAAA
CAAGATAATCAATTTATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Oxidoreductase Related Nitroreductase; Oxidoreductase Related Nitroreductase-Like Protein; Oxydoreductase Related Nitroreductase; Ypothetical Protein SMU.; Oxidoreductase/Nitroreductase

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHDKLWSITKEALRKIVPEDKFG
STEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFPIWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKK
EWNIPNNWKLIAQMPFGKPVVKPDEKQYKPLEERIKIIK

Sequences:

>Translated_199_residues
MKKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHDKLWSITKEALRKIVPEDKFG
STEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFPIWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKK
EWNIPNNWKLIAQMPFGKPVVKPDEKQYKPLEERIKIIK
>Mature_199_residues
MKKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHDKLWSITKEALRKIVPEDKFG
STEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFPIWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKK
EWNIPNNWKLIAQMPFGKPVVKPDEKQYKPLEERIKIIK

Specific function: Unknown

COG id: COG3560

COG function: function code R; Predicted oxidoreductase related to nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6319823, Length=187, Percent_Identity=31.5508021390374, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23210; Mature: 23210

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHD
CCHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCH
KLWSITKEALRKIVPEDKFGSTEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
IWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKKEWNIPNNWKLIAQMPFGKPV
CCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
VKPDEKQYKPLEERIKIIK
CCCCHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKKDFYEAIKERRTFYGISKEALVSDDRIKEVIEHAVKHTPSAFNSQSARVVLLLGDKHD
CCHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCH
KLWSITKEALRKIVPEDKFGSTEEKINSFASGYGTILYFEDMSVVEDLQKQFSLYKDNFP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
IWSQQSSGMLQFVIWTSLEIEGFGASLQHYNELIEEDVKKEWNIPNNWKLIAQMPFGKPV
CCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
VKPDEKQYKPLEERIKIIK
CCCCHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA