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The map label for this gene is etfB [H]

Identifier: 226949463

GI number: 226949463

Start: 2473868

End: 2474653

Strand: Reverse

Name: etfB [H]

Synonym: CLM_2396

Alternate gene names: 226949463

Gene position: 2474653-2473868 (Counterclockwise)

Preceding gene: 226949464

Following gene: 226949462

Centisome position: 59.55

GC content: 34.61

Gene sequence:

>786_bases
TTGAGGATAGTAGTATGTGTTAAGCAAGTTCCAGATACAACAGAAGTAAAGATAGATCCTAAAACAGGAACATTAATAAG
AGAAGGTGTTCCAAGTATATTAAATCCAGATGATGCAAATGCACTTGAGGAAGCTTTAAAAATGAAAGACAAAGATGAAA
ATGTAACTGTGTCAGTGGTTTCAATGGGACCACCACAAGCAGATGTTATGCTAAGAGAATGTCTTGCAATGGGAGCAGAT
GAAGCTTATTTAGTAAGTGATAGAGCATTTGCAGGTTCTGATACCTGGGCTACTTCAAAGGTTATTGCATCAGCAATTAG
AAAGATTGGAAATTATGATATTATATTCGCAGGAAGACAAGCTATAGATGGAGATACAGCACAGGTTGGACCACAAATTT
CAGAAAAATTAGGTATTCCACAGGTTACTTATGTACAAGACTTTAAAATGGAAGAGGACAAAATAACAGTACAAAGACAG
CTAGAGGATGGATATGAAATAATTAGGGTTAAAAAACCTGCTCTTTTAACAGCTGTAAGTTCTCTTAATGAGCCTAGATA
TATGGCTGTGGACAAAATATTTGATGCCTATAAAAAGGAAATAAAAGTTTTAACTATAGATGATTTAGATATAGAAAAGG
AAGGAGTAGGTCTTAAGGCTTCTCCAACTAAAGTGTTTAGATCCTTTACTCCAGCACCTAAAGGTAAGGGTGTTATGCTA
GAAGGATCAACAGAAGAGATGGTTGAAAAATTGGTTGTAAGTTTGAAACAAAAGCATATTATATAA

Upstream 100 bases:

>100_bases
ATCTATATATGAAGGTACATCTCAAGTTCAGCAAATGGTTATTGCTGCGAAAGCTCTTAAATAGATATATGAGAAATAAA
CAAAATTGGAGGTTAAGAAT

Downstream 100 bases:

>100_bases
AAATGATCGGAGGGTAATATGGATATAAAAAAAGATTTAAGTAGTTATAAAAATGTCTGGGTAATTGCAGAACAAAGACA
GGGAAAAATAACTCCTGTAG

Product: electron transfer flavoprotein subunit beta/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRIVVCVKQVPDTTEVKIDPKTGTLIREGVPSILNPDDANALEEALKMKDKDENVTVSVVSMGPPQADVMLRECLAMGAD
EAYLVSDRAFAGSDTWATSKVIASAIRKIGNYDIIFAGRQAIDGDTAQVGPQISEKLGIPQVTYVQDFKMEEDKITVQRQ
LEDGYEIIRVKKPALLTAVSSLNEPRYMAVDKIFDAYKKEIKVLTIDDLDIEKEGVGLKASPTKVFRSFTPAPKGKGVML
EGSTEEMVEKLVVSLKQKHII

Sequences:

>Translated_261_residues
MRIVVCVKQVPDTTEVKIDPKTGTLIREGVPSILNPDDANALEEALKMKDKDENVTVSVVSMGPPQADVMLRECLAMGAD
EAYLVSDRAFAGSDTWATSKVIASAIRKIGNYDIIFAGRQAIDGDTAQVGPQISEKLGIPQVTYVQDFKMEEDKITVQRQ
LEDGYEIIRVKKPALLTAVSSLNEPRYMAVDKIFDAYKKEIKVLTIDDLDIEKEGVGLKASPTKVFRSFTPAPKGKGVML
EGSTEEMVEKLVVSLKQKHII
>Mature_261_residues
MRIVVCVKQVPDTTEVKIDPKTGTLIREGVPSILNPDDANALEEALKMKDKDENVTVSVVSMGPPQADVMLRECLAMGAD
EAYLVSDRAFAGSDTWATSKVIASAIRKIGNYDIIFAGRQAIDGDTAQVGPQISEKLGIPQVTYVQDFKMEEDKITVQRQ
LEDGYEIIRVKKPALLTAVSSLNEPRYMAVDKIFDAYKKEIKVLTIDDLDIEKEGVGLKASPTKVFRSFTPAPKGKGVML
EGSTEEMVEKLVVSLKQKHII

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=256, Percent_Identity=34.765625, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI62420877, Length=239, Percent_Identity=34.3096234309623, Blast_Score=111, Evalue=6e-25,
Organism=Escherichia coli, GI2367123, Length=262, Percent_Identity=26.3358778625954, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87081682, Length=263, Percent_Identity=26.615969581749, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI25141345, Length=220, Percent_Identity=37.7272727272727, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6321646, Length=259, Percent_Identity=30.8880308880309, Blast_Score=108, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24651147, Length=263, Percent_Identity=33.4600760456274, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24651145, Length=263, Percent_Identity=33.4600760456274, Blast_Score=101, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28702; Mature: 28702

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVVCVKQVPDTTEVKIDPKTGTLIREGVPSILNPDDANALEEALKMKDKDENVTVSVV
CEEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE
SMGPPQADVMLRECLAMGADEAYLVSDRAFAGSDTWATSKVIASAIRKIGNYDIIFAGRQ
ECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
AIDGDTAQVGPQISEKLGIPQVTYVQDFKMEEDKITVQRQLEDGYEIIRVKKPALLTAVS
CCCCCCHHCCCHHHHHCCCCEEEEHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHH
SLNEPRYMAVDKIFDAYKKEIKVLTIDDLDIEKEGVGLKASPTKVFRSFTPAPKGKGVML
HCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE
EGSTEEMVEKLVVSLKQKHII
ECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIVVCVKQVPDTTEVKIDPKTGTLIREGVPSILNPDDANALEEALKMKDKDENVTVSVV
CEEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE
SMGPPQADVMLRECLAMGADEAYLVSDRAFAGSDTWATSKVIASAIRKIGNYDIIFAGRQ
ECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCC
AIDGDTAQVGPQISEKLGIPQVTYVQDFKMEEDKITVQRQLEDGYEIIRVKKPALLTAVS
CCCCCCHHCCCHHHHHCCCCEEEEHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHH
SLNEPRYMAVDKIFDAYKKEIKVLTIDDLDIEKEGVGLKASPTKVFRSFTPAPKGKGVML
HCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE
EGSTEEMVEKLVVSLKQKHII
ECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA