BacMap

Definition	Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession	NC_012563
Length	4,155,278

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The map label for this gene is cshA [H]

Identifier: 226949308

GI number: 226949308

Start: 2295689

End: 2296819

Strand: Direct

Name: cshA [H]

Synonym: CLM_2228

Alternate gene names: 226949308

Gene position: 2295689-2296819 (Clockwise)

Preceding gene: 226949302

Following gene: 226949309

Centisome position: 55.25

GC content: 30.33

Gene sequence:

>1131_bases
ATGATAAAATTTGCAGAACTAGGTCTTAGTGATAGTATAATAGATGTTCTTAAAAAACAAAGAATCATTGAGCCAACACC
AATTCAAGAAGAAAGTATTATGTTTATAAAAAATGGTAATGATGTTATAGCTGAAGCTCAAACTGGAACTGGAAAAACCC
TTGCATTTTTACTTCCAATGTTTGAAAATATATCTCCTGATATAAACGCAATTCAAGGTTTAATAATAACACCTACAAGA
GAACTTGCTATACAAATAACTGAGGAAGCTATGAAGTTAAAAGAAGCTAAAGATTTGAATATTTTAGCTGCCTATGGTGG
TAAAGATATAGGCTCACAAATAAAAAAACTTAAAAATAATATACATTTGGTAATTGCAACTCCCGGTAGACTTTTAGATC
ATCTTAATAGAAACACACTAAATTTTAAAGATTTAAAAACATTAGTATTAGATGAAGCTGATGAAATGCTCCTTATGGGA
TTTAAGAATGATGTTCGATCTATTATAGAGAATACACCAAGGAAACGCCAAACACTATGTTTTTCAGCAACAATGAATTC
TGAAGTTAAAAAGCTAGCCTATAAAAACATGCGTGATCCCAGACTAATAATAATAGAAAAAGAAGAAGTAACTCTTAAAA
ATATCAAACAAGTTTTAATAGAAACCACTGACAGAAGAAAGCAAGAGGATTTGTGCAAAATATTAGATGAAGAAAATCCA
TTTATGGCTATTATCTTTTGTAGAACCAAAAGAAGAGTTGATACTCTTGAGGAAGCCCTTTATAAAAAGGGTTATAACTG
TGAAAAGCTTCATGGTAGCATAACTCAACCAAAGCGTGAAAGAATAATGCGTTCCTTTAAAAATTTAGAAATTCAATATT
TAATAGCTACGGATGTAGCAGCTAGAGGCCTTGATATAACTGGTGTTACTCATGTTTTTAACTATGATATTCCTGAAAAT
GCTGAAAGCTATATACACCGTATAGGCAGAACTGGGAGAGCTGGTGAAAAAGGATATACATTCCTATTTGTAGCACCCAA
AGATGAACAAACTTTAAGTATTATAGAAAGAGAAATTAAATTTAAAATTTCTAGGAAAACTTTAACAAATTCTAAAGAGG
ATAACAAATAA

Upstream 100 bases:

>100_bases
CTTCCATATTTCTTTTTATTGTATTAAAAATGTGTTATACTTAGCTGATTTAACTTATAGAAAGCTAAAAATATATTTAA
AAATTGAAAGGTAAATTATT

Downstream 100 bases:

>100_bases
TCCTCTTTAGAATTGATTATATATCCATCTCCATACTATTCAAAGGCATTTCCTTGTATTGCTACTATATGAGCCTTATT
TAACAATTCATCCAAAAGCA

Product: DEAD/DEAH box family ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MIKFAELGLSDSIIDVLKKQRIIEPTPIQEESIMFIKNGNDVIAEAQTGTGKTLAFLLPMFENISPDINAIQGLIITPTR
ELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNNIHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMG
FKNDVRSIIENTPRKRQTLCFSATMNSEVKKLAYKNMRDPRLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVAARGLDITGVTHVFNYDIPEN
AESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLSIIEREIKFKISRKTLTNSKEDNK

Sequences:

>Translated_376_residues
MIKFAELGLSDSIIDVLKKQRIIEPTPIQEESIMFIKNGNDVIAEAQTGTGKTLAFLLPMFENISPDINAIQGLIITPTR
ELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNNIHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMG
FKNDVRSIIENTPRKRQTLCFSATMNSEVKKLAYKNMRDPRLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVAARGLDITGVTHVFNYDIPEN
AESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLSIIEREIKFKISRKTLTNSKEDNK
>Mature_376_residues
MIKFAELGLSDSIIDVLKKQRIIEPTPIQEESIMFIKNGNDVIAEAQTGTGKTLAFLLPMFENISPDINAIQGLIITPTR
ELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNNIHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMG
FKNDVRSIIENTPRKRQTLCFSATMNSEVKKLAYKNMRDPRLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVAARGLDITGVTHVFNYDIPEN
AESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLSIIEREIKFKISRKTLTNSKEDNK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=355, Percent_Identity=38.5915492957746, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=38.8586956521739, Blast_Score=251, Evalue=7e-67,
Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=38.8586956521739, Blast_Score=251, Evalue=7e-67,
Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=39.1780821917808, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=39.1780821917808, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=39.1780821917808, Blast_Score=248, Evalue=5e-66,
Organism=Homo sapiens, GI148613856, Length=357, Percent_Identity=38.375350140056, Blast_Score=242, Evalue=5e-64,
Organism=Homo sapiens, GI38201710, Length=357, Percent_Identity=38.375350140056, Blast_Score=242, Evalue=5e-64,
Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=38.5714285714286, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=39.6067415730337, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI4758138, Length=362, Percent_Identity=38.121546961326, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI45446747, Length=353, Percent_Identity=37.3937677053824, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI45446743, Length=353, Percent_Identity=37.3937677053824, Blast_Score=231, Evalue=8e-61,
Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=38.5674931129477, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI164664518, Length=341, Percent_Identity=35.7771260997067, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=38.0952380952381, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI83700235, Length=355, Percent_Identity=38.8732394366197, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI55749865, Length=337, Percent_Identity=36.4985163204748, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI31542656, Length=371, Percent_Identity=36.9272237196765, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=36.3157894736842, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=34.733893557423, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=34.733893557423, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=34.733893557423, Blast_Score=211, Evalue=6e-55,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=34.733893557423, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=34.8441926345609, Blast_Score=210, Evalue=1e-54,
Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=36.6197183098592, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI50659095, Length=390, Percent_Identity=34.1025641025641, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI224593278, Length=374, Percent_Identity=34.2245989304813, Blast_Score=208, Evalue=5e-54,
Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=35.7541899441341, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=34.7368421052632, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=32.3699421965318, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=32.3699421965318, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI21040371, Length=330, Percent_Identity=32.7272727272727, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=34.3490304709141, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=32.5648414985591, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=32.5648414985591, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=32.2493224932249, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI164419732, Length=331, Percent_Identity=35.3474320241692, Blast_Score=178, Evalue=6e-45,
Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=32.972972972973, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=32.972972972973, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=33.8935574229692, Blast_Score=174, Evalue=9e-44,
Organism=Homo sapiens, GI62241022, Length=347, Percent_Identity=33.7175792507205, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=34.1389728096677, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI38569503, Length=343, Percent_Identity=33.2361516034985, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38569505, Length=343, Percent_Identity=33.2361516034985, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=29.8630136986301, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI9506931, Length=407, Percent_Identity=28.7469287469287, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.6122448979592, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI256773275, Length=408, Percent_Identity=29.1666666666667, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=30.2931596091205, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI17505907, Length=410, Percent_Identity=27.3170731707317, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI154759257, Length=372, Percent_Identity=26.3440860215054, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=34.1013824884793, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI4557365, Length=334, Percent_Identity=26.0479041916168, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI51242943, Length=367, Percent_Identity=23.433242506812, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI51242947, Length=367, Percent_Identity=23.433242506812, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI148612816, Length=367, Percent_Identity=23.433242506812, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87082221, Length=370, Percent_Identity=43.5135135135135, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=38.2585751978892, Blast_Score=266, Evalue=1e-72,
Organism=Escherichia coli, GI1790214, Length=370, Percent_Identity=39.1891891891892, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1787605, Length=343, Percent_Identity=38.1924198250729, Blast_Score=245, Evalue=4e-66,
Organism=Escherichia coli, GI1788930, Length=359, Percent_Identity=35.3760445682451, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI48994977, Length=340, Percent_Identity=23.8235294117647, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71987143, Length=334, Percent_Identity=42.2155688622754, Blast_Score=271, Evalue=5e-73,
Organism=Caenorhabditis elegans, GI71995724, Length=356, Percent_Identity=37.9213483146067, Blast_Score=251, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=356, Percent_Identity=37.6404494382022, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=35.3591160220994, Blast_Score=247, Evalue=9e-66,
Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=37.6731301939058, Blast_Score=245, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=38.6740331491713, Blast_Score=241, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=38.3522727272727, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=35.6200527704486, Blast_Score=225, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=36.2397820163488, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=36.2397820163488, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=36.2397820163488, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=37.0879120879121, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=35.3099730458221, Blast_Score=214, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=34.8167539267016, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=35.8695652173913, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17552642, Length=353, Percent_Identity=36.5439093484419, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17509811, Length=362, Percent_Identity=33.7016574585635, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17537549, Length=372, Percent_Identity=33.6021505376344, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=33.59375, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=31.7919075144509, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=31.8051575931232, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=345, Percent_Identity=31.5942028985507, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.6883468834688, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.4054054054054, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=352, Percent_Identity=36.3636363636364, Blast_Score=184, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17553716, Length=341, Percent_Identity=32.5513196480938, Blast_Score=178, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=333, Percent_Identity=35.1351351351351, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=394, Percent_Identity=31.2182741116751, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17536101, Length=394, Percent_Identity=31.2182741116751, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI71990816, Length=367, Percent_Identity=31.8801089918256, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17536103, Length=395, Percent_Identity=31.1392405063291, Blast_Score=167, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=28.9398280802292, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=369, Percent_Identity=29.5392953929539, Blast_Score=157, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=352, Percent_Identity=29.5454545454545, Blast_Score=154, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI193208216, Length=395, Percent_Identity=29.1139240506329, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.5918367346939, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=30.5263157894737, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=424, Percent_Identity=27.122641509434, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=367, Percent_Identity=25.0681198910082, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=344, Percent_Identity=26.1627906976744, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=182, Percent_Identity=31.8681318681319, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17557982, Length=389, Percent_Identity=25.9640102827763, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=46.7391304347826, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17566630, Length=345, Percent_Identity=25.7971014492754, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI32564293, Length=355, Percent_Identity=26.7605633802817, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI25145561, Length=341, Percent_Identity=24.3401759530792, Blast_Score=76, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=37.2602739726027, Blast_Score=250, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=38.2920110192837, Blast_Score=246, Evalue=5e-66,
Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=38.3977900552486, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6324217, Length=349, Percent_Identity=38.3954154727794, Blast_Score=239, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6320041, Length=341, Percent_Identity=35.7771260997067, Blast_Score=233, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6323021, Length=379, Percent_Identity=36.4116094986807, Blast_Score=219, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6322912, Length=325, Percent_Identity=36, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6322323, Length=325, Percent_Identity=36, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321360, Length=348, Percent_Identity=38.5057471264368, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=36.5122615803815, Blast_Score=211, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=34.6153846153846, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=36.2204724409449, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6320119, Length=363, Percent_Identity=32.2314049586777, Blast_Score=195, Evalue=9e-51,
Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=36.0881542699724, Blast_Score=194, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=36.1344537815126, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320173, Length=399, Percent_Identity=28.0701754385965, Blast_Score=183, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6319618, Length=441, Percent_Identity=33.5600907029478, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6324620, Length=368, Percent_Identity=32.0652173913043, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6320400, Length=366, Percent_Identity=34.6994535519126, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=321, Percent_Identity=37.0716510903427, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=372, Percent_Identity=30.3763440860215, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6322876, Length=431, Percent_Identity=29.4663573085847, Blast_Score=146, Evalue=6e-36,
Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.1927710843373, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6321111, Length=344, Percent_Identity=29.6511627906977, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6324366, Length=365, Percent_Identity=26.8493150684932, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6321374, Length=424, Percent_Identity=26.8867924528302, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24645031, Length=335, Percent_Identity=39.7014925373134, Blast_Score=254, Evalue=6e-68,
Organism=Drosophila melanogaster, GI24584399, Length=357, Percent_Identity=40.6162464985994, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24644487, Length=351, Percent_Identity=39.031339031339, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI45551833, Length=351, Percent_Identity=39.031339031339, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24644485, Length=351, Percent_Identity=39.031339031339, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI281361218, Length=351, Percent_Identity=39.031339031339, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24644481, Length=351, Percent_Identity=39.031339031339, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24644483, Length=351, Percent_Identity=39.031339031339, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24644479, Length=351, Percent_Identity=39.031339031339, Blast_Score=241, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=38.5269121813031, Blast_Score=241, Evalue=6e-64,
Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=37.7308707124011, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=36.6847826086957, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=38.4615384615385, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24582080, Length=339, Percent_Identity=39.8230088495575, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24582078, Length=339, Percent_Identity=39.8230088495575, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI17136248, Length=339, Percent_Identity=39.8230088495575, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24582075, Length=339, Percent_Identity=39.8230088495575, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24583281, Length=339, Percent_Identity=35.3982300884956, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24583279, Length=339, Percent_Identity=35.3982300884956, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24585582, Length=378, Percent_Identity=37.3015873015873, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.7123287671233, Blast_Score=218, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=36.5535248041775, Blast_Score=215, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17136814, Length=369, Percent_Identity=37.940379403794, Blast_Score=208, Evalue=4e-54,
Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=35.6545961002786, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI21356161, Length=368, Percent_Identity=36.4130434782609, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI17977678, Length=368, Percent_Identity=34.5108695652174, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=32.8651685393258, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.8589743589744, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=33.6, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24581954, Length=331, Percent_Identity=32.9305135951662, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24581952, Length=331, Percent_Identity=32.9305135951662, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24581956, Length=331, Percent_Identity=32.9305135951662, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21355559, Length=400, Percent_Identity=33.25, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=33.2402234636872, Blast_Score=177, Evalue=9e-45,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=33.2402234636872, Blast_Score=177, Evalue=9e-45,
Organism=Drosophila melanogaster, GI18859659, Length=450, Percent_Identity=30.4444444444444, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28571338, Length=450, Percent_Identity=30.4444444444444, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=31.0734463276836, Blast_Score=174, Evalue=7e-44,
Organism=Drosophila melanogaster, GI20130173, Length=438, Percent_Identity=27.8538812785388, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24668515, Length=339, Percent_Identity=31.5634218289086, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=29.8850574712644, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24643725, Length=411, Percent_Identity=25.5474452554745, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=25.5014326647564, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19920478, Length=331, Percent_Identity=26.5861027190332, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=25.2427184466019, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646066, Length=328, Percent_Identity=24.0853658536585, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 43015; Mature: 43015

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFAELGLSDSIIDVLKKQRIIEPTPIQEESIMFIKNGNDVIAEAQTGTGKTLAFLLPM
CCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHH
FENISPDINAIQGLIITPTRELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNN
HHCCCCCHHHHCCEEEECCHHHHEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
IHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMGFKNDVRSIIENTPRKRQTLC
EEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCHHEEHHHHHHHHHHHHCCCCHHHEEE
FSATMNSEVKKLAYKNMRDPRLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
EEEHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVA
EEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEEEECHH
ARGLDITGVTHVFNYDIPENAESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLSIIEREIK
HCCCCEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH
FKISRKTLTNSKEDNK
HEEEHHHHCCCCCCCC
>Mature Secondary Structure
MIKFAELGLSDSIIDVLKKQRIIEPTPIQEESIMFIKNGNDVIAEAQTGTGKTLAFLLPM
CCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHH
FENISPDINAIQGLIITPTRELAIQITEEAMKLKEAKDLNILAAYGGKDIGSQIKKLKNN
HHCCCCCHHHHCCEEEECCHHHHEEEHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
IHLVIATPGRLLDHLNRNTLNFKDLKTLVLDEADEMLLMGFKNDVRSIIENTPRKRQTLC
EEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCCHHEEHHHHHHHHHHHHCCCCHHHEEE
FSATMNSEVKKLAYKNMRDPRLIIIEKEEVTLKNIKQVLIETTDRRKQEDLCKILDEENP
EEEHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
FMAIIFCRTKRRVDTLEEALYKKGYNCEKLHGSITQPKRERIMRSFKNLEIQYLIATDVA
EEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEEEECHH
ARGLDITGVTHVFNYDIPENAESYIHRIGRTGRAGEKGYTFLFVAPKDEQTLSIIEREIK
HCCCCEECEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH
FKISRKTLTNSKEDNK
HEEEHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]