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The map label for this gene is 226949276

Identifier: 226949276

GI number: 226949276

Start: 2258279

End: 2259391

Strand: Direct

Name: 226949276

Synonym: CLM_2195

Alternate gene names: NA

Gene position: 2258279-2259391 (Clockwise)

Preceding gene: 226949275

Following gene: 226949277

Centisome position: 54.35

GC content: 26.95

Gene sequence:

>1113_bases
ATGAAAAATAAAATGAAAATAATAATAAGAGTTTCTTTTGTTTTAATTATAATTGTTAATTTAATAGGGAAAAGAGGGAC
TGTGGTAGAAGAACTGAATCTTCCCAATAGCATAGGTTATGACATATTAGAAAAAAAAGGGGACCAAGTATTGTATAGTG
TGCCCCTGAGAACTTATTTTTCAGAAAGTAAAATGCCCAATGAAAGCCAATTAGTAACTTCAAAGGCAATAAATTTAGGG
GAAACTAGAAACAAAAGACAGCTACAAGCTAGTAAAGAATTTATATTAGGATTAGAAAAGTCCCTGATTATTAGTGAAAA
AGCTGCTAGATTTGGAATAAGCAATGTAATAGATATATTGCTTAATAATCCTTTAGTAAATGATAATGCTAAAATGGTAG
TCTGTGCTGGTACAGCAAAGGATATTATGGAGTATGAAGTAAAAAAATATAGTGGCACAGAGGAATATGTTGGTACATTA
GTAGAACATTTAAATAAATTTAATTTCTTTTCTGAGAAATACAGTTTGATAGATTTTATTATAAAATCTAGCTCGGAAGG
AAAAAATCCAATTATACCCTATCTAGATATTGTAGAAGATGAATTAAAAATAACAGGTGTAGCTATTTTTGACAAAACCA
AAATGGTAAAAAAATTAGATATTGAAGATGTAAAAATATTAAACTTATTAAGAGAAAATAAGGGAAAAGGTATTTTAACT
ATTCAAAAAAACTCTAAAGAATATATAAATTATTATCCACAAGCTAAAAAAAAGGTTAAATGTTATAAAGAAGGGAATAA
ATATAAATTTATAATAAATATTACCCTTAAGGGACCTATTATATCTAATCAATTATATAAAGATTTGAATACTGATCCAA
AAGTATTAAAAAAATTTGAAAAGGATATGGAAGAGTCTGTAGAAAAAAAATGTGCACACTTTATAAGCAAAATGAAAGAT
AGTTTCAAAGTAGATGTATTAGAATTAGGAAATGTTGCTGCAGCCAAATACGGAAGAGAAACTGATGTAGATTGGAATAA
AGAAGTATTGAACTCTGAAATAAAAGTTAATGTAAAAGTTAAAGTAGATAGTCAAGGCAGAGGAGACTACTAA

Upstream 100 bases:

>100_bases
AGAAATTTTTTAGATAAAATTTTCCCACCCTATGTAATTTTTAATATTATATTTATTTCTATTACTGCTTTATTAGTAGC
TTTAGGAAAAGGTGATGAAA

Downstream 100 bases:

>100_bases
TTAAAAATATTCTGCTTTATAGTAAATTAGGAGGATATTTCATGAACATTAATAGAGATAATGAATTGACAGAAATGCAA
TTCACTCTAATTTTAATAGG

Product: germination protein, Ger(x)C family

Products: NA

Alternate protein names: Germination Protein Ger(X)C Family; Spore Germination B3 GerAC Family Protein; Spore Germination Protein GerKC; Spore Germination Protein GerA; Spore Germination Protein KC; Spore Germination Protein GerAC; Spore Germination Protein QC

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKNKMKIIIRVSFVLIIIVNLIGKRGTVVEELNLPNSIGYDILEKKGDQVLYSVPLRTYFSESKMPNESQLVTSKAINLG
ETRNKRQLQASKEFILGLEKSLIISEKAARFGISNVIDILLNNPLVNDNAKMVVCAGTAKDIMEYEVKKYSGTEEYVGTL
VEHLNKFNFFSEKYSLIDFIIKSSSEGKNPIIPYLDIVEDELKITGVAIFDKTKMVKKLDIEDVKILNLLRENKGKGILT
IQKNSKEYINYYPQAKKKVKCYKEGNKYKFIINITLKGPIISNQLYKDLNTDPKVLKKFEKDMEESVEKKCAHFISKMKD
SFKVDVLELGNVAAAKYGRETDVDWNKEVLNSEIKVNVKVKVDSQGRGDY

Sequences:

>Translated_370_residues
MKNKMKIIIRVSFVLIIIVNLIGKRGTVVEELNLPNSIGYDILEKKGDQVLYSVPLRTYFSESKMPNESQLVTSKAINLG
ETRNKRQLQASKEFILGLEKSLIISEKAARFGISNVIDILLNNPLVNDNAKMVVCAGTAKDIMEYEVKKYSGTEEYVGTL
VEHLNKFNFFSEKYSLIDFIIKSSSEGKNPIIPYLDIVEDELKITGVAIFDKTKMVKKLDIEDVKILNLLRENKGKGILT
IQKNSKEYINYYPQAKKKVKCYKEGNKYKFIINITLKGPIISNQLYKDLNTDPKVLKKFEKDMEESVEKKCAHFISKMKD
SFKVDVLELGNVAAAKYGRETDVDWNKEVLNSEIKVNVKVKVDSQGRGDY
>Mature_370_residues
MKNKMKIIIRVSFVLIIIVNLIGKRGTVVEELNLPNSIGYDILEKKGDQVLYSVPLRTYFSESKMPNESQLVTSKAINLG
ETRNKRQLQASKEFILGLEKSLIISEKAARFGISNVIDILLNNPLVNDNAKMVVCAGTAKDIMEYEVKKYSGTEEYVGTL
VEHLNKFNFFSEKYSLIDFIIKSSSEGKNPIIPYLDIVEDELKITGVAIFDKTKMVKKLDIEDVKILNLLRENKGKGILT
IQKNSKEYINYYPQAKKKVKCYKEGNKYKFIINITLKGPIISNQLYKDLNTDPKVLKKFEKDMEESVEKKCAHFISKMKD
SFKVDVLELGNVAAAKYGRETDVDWNKEVLNSEIKVNVKVKVDSQGRGDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42180; Mature: 42180

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKMKIIIRVSFVLIIIVNLIGKRGTVVEELNLPNSIGYDILEKKGDQVLYSVPLRTYF
CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCHHHHH
SESKMPNESQLVTSKAINLGETRNKRQLQASKEFILGLEKSLIISEKAARFGISNVIDIL
HHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LNNPLVNDNAKMVVCAGTAKDIMEYEVKKYSGTEEYVGTLVEHLNKFNFFSEKYSLIDFI
HCCCEECCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKSSSEGKNPIIPYLDIVEDELKITGVAIFDKTKMVKKLDIEDVKILNLLRENKGKGILT
HHCCCCCCCCCCCHHHHHCCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHCCCCEEEE
IQKNSKEYINYYPQAKKKVKCYKEGNKYKFIINITLKGPIISNQLYKDLNTDPKVLKKFE
EECCCHHHHHHCCCHHHHHHHEECCCEEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHH
KDMEESVEKKCAHFISKMKDSFKVDVLELGNVAAAKYGRETDVDWNKEVLNSEIKVNVKV
HHHHHHHHHHHHHHHHHHHHCCEEEEEHHCCHHHHHCCCCCCCCCCHHHCCCEEEEEEEE
KVDSQGRGDY
EECCCCCCCC
>Mature Secondary Structure
MKNKMKIIIRVSFVLIIIVNLIGKRGTVVEELNLPNSIGYDILEKKGDQVLYSVPLRTYF
CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCHHHHH
SESKMPNESQLVTSKAINLGETRNKRQLQASKEFILGLEKSLIISEKAARFGISNVIDIL
HHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LNNPLVNDNAKMVVCAGTAKDIMEYEVKKYSGTEEYVGTLVEHLNKFNFFSEKYSLIDFI
HCCCEECCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKSSSEGKNPIIPYLDIVEDELKITGVAIFDKTKMVKKLDIEDVKILNLLRENKGKGILT
HHCCCCCCCCCCCHHHHHCCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHCCCCEEEE
IQKNSKEYINYYPQAKKKVKCYKEGNKYKFIINITLKGPIISNQLYKDLNTDPKVLKKFE
EECCCHHHHHHCCCHHHHHHHEECCCEEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHH
KDMEESVEKKCAHFISKMKDSFKVDVLELGNVAAAKYGRETDVDWNKEVLNSEIKVNVKV
HHHHHHHHHHHHHHHHHHHHCCEEEEEHHCCHHHHHCCCCCCCCCCHHHCCCEEEEEEEE
KVDSQGRGDY
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA