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The map label for this gene is yloA [H]

Identifier: 226949211

GI number: 226949211

Start: 2179447

End: 2181177

Strand: Direct

Name: yloA [H]

Synonym: CLM_2130

Alternate gene names: 226949211

Gene position: 2179447-2181177 (Clockwise)

Preceding gene: 226949165

Following gene: 226949212

Centisome position: 52.45

GC content: 25.53

Gene sequence:

>1731_bases
ATGGCTTTAGATGGGATTTTTTTATTTAGTATGATAAATGAAATGAAAACCAAAATATTGAACGGTAGAGTGGATAAAGT
AACTCAGCCAGAAAAGGATGAAATAGTTTTATCCATAAAAAATAATAGAAAAACTTACAAACTTTTAATTAGTTCTAGCG
CTGTATACCCTAAAATACATTTTACGGATATTCCTAAGAAAAATCCTATGCAGCCCCCTATGTTTTGTATGGTTCTTAGA
AAATACTTAAATTCTTCCAAAATAATAAATATAAGACAATTGGATACGGATAGAATAGTCTTAATAGACTTTGAAAGTGC
TGATGAAATGGGATTTAACAGTATATATACGTTAATTATAGAAATTATGGGGAGACATAGTAATATAACCTTAGTAAGAG
AAAGGGATAATCTAATAATGGATAGCATAAAACATGTTACTCCTGAAATAAATAGTGTAAGGAATCTTTATCCTTCTATA
GAATATATATATCCACCAGCGTCTTTAAAACTAAATCCTTTTAATTTTTCACTAAAAGATTTTAAAGATTATATAAAAGA
TAATAACGTGAAACTTAATAAAACTATGTTTTCCAATATATTTACAGGAGTAGCAATACCCTTTTCTAGGGAAATTTTTT
ACAGATTAGAAAGAGAAAATAATCTAGAAATTACTTTAGAAAACATGGATGAAATATGTGTTATTGCAAAAAATATATTT
GATTCTATAAAAAATAAAGAATTTTATTTTAATTGTTATTTAGAAAAGGACACTGTAAAAGATTTTTATTGTGTAAATCT
TCATAGTTTAGATAATTTAAAAAATATACATTATGAAAATCCTTCTCTTCTTATAGAATCTTTTTATTTCGAAAAGGATA
AAGCAGATAGATTAAATTCTAAAAGCTCTGATCTTCAAAAATTAATAAATCTAAACATTGAAAGATGCGAAAAGAAAATC
AAAATATTAGAAGGAAATTTAAAGGATTGCGATGAAAAAGAAAAATTTCAAATATGTGGAGAAATTTTAACTGCTAACAT
ATATGCTCTTAAGAAGGGTATGGATAAAGTAAATCTTTTGAACTATTATACTAATGAATATATGGATATAAAATTAGATC
CTAACAAAAACCCTTCCGATAACATACAAAAGTACTTTAAAAAATATAATAAGCTAAAAAAGACTGAAGTTGCAGCTAAA
GAACAAATAGAACTTACTTGTGACGAGTTAAAATATCTAAATTCTGTTTTAACTAGTATAAAAAATGCAGATAGTTATGA
TGATATAGAAGAAATTAAAAGAGAACTTATTGAAACAGGCTATATTAAATTTAAAAAGAAAAATAATAAGAAATTTAAAA
ATACAAAACCATTGCACTTTATTTCTTCAGATGGCATAGATATTTATGTGGGAAAAAACAATATACAAAATGATTATCTA
ACATTAAAATTTGCTAGTAATCATGACATTTGGATGCACACAAAAAATATACCTGGATCACATGTAATAGTTAAAAATTT
CCAAGGAAATGTTCCTGAAAAAACTTTAGAAGAAGCTGCCACATTAGCAGCCTTTTATAGTAAATCTAAAGATTCTACAA
AAGTTCCTGTAGACTACACAGAGGTTAAAAATGTTCACAAACCTAATGGGGCAAAACCAGGTATGGTAATATATTACACA
AACAAAACCATATTTATAGATCCAAAAGAACCTAATTTAAAACAAATTTAG

Upstream 100 bases:

>100_bases
TAAAAATTTAAAATGGTATACTAATATAAGTTTAATAGCCTTTGATATTAGCATACTTTGCTATATACATTATATTATAC
CATTTTAAGGAGGAATATTT

Downstream 100 bases:

>100_bases
AACAGATTAAAAAGTAATATCTAAATAAAACTAATTAACTAAATATATTTGTAAAGGAAGTACTAAATATGACTAATATA
AAATTATATATACAATATGA

Product: fibronectin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIHFTDIPKKNPMQPPMFCMVLR
KYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLIIEIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSI
EYIYPPASLKLNPFNFSLKDFKDYIKDNNVKLNKTMFSNIFTGVAIPFSREIFYRLERENNLEITLENMDEICVIAKNIF
DSIKNKEFYFNCYLEKDTVKDFYCVNLHSLDNLKNIHYENPSLLIESFYFEKDKADRLNSKSSDLQKLINLNIERCEKKI
KILEGNLKDCDEKEKFQICGEILTANIYALKKGMDKVNLLNYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAK
EQIELTCDELKYLNSVLTSIKNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
TLKFASNHDIWMHTKNIPGSHVIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYTEVKNVHKPNGAKPGMVIYYT
NKTIFIDPKEPNLKQI

Sequences:

>Translated_576_residues
MALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIHFTDIPKKNPMQPPMFCMVLR
KYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLIIEIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSI
EYIYPPASLKLNPFNFSLKDFKDYIKDNNVKLNKTMFSNIFTGVAIPFSREIFYRLERENNLEITLENMDEICVIAKNIF
DSIKNKEFYFNCYLEKDTVKDFYCVNLHSLDNLKNIHYENPSLLIESFYFEKDKADRLNSKSSDLQKLINLNIERCEKKI
KILEGNLKDCDEKEKFQICGEILTANIYALKKGMDKVNLLNYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAK
EQIELTCDELKYLNSVLTSIKNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
TLKFASNHDIWMHTKNIPGSHVIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYTEVKNVHKPNGAKPGMVIYYT
NKTIFIDPKEPNLKQI
>Mature_575_residues
ALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIHFTDIPKKNPMQPPMFCMVLRK
YLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLIIEIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSIE
YIYPPASLKLNPFNFSLKDFKDYIKDNNVKLNKTMFSNIFTGVAIPFSREIFYRLERENNLEITLENMDEICVIAKNIFD
SIKNKEFYFNCYLEKDTVKDFYCVNLHSLDNLKNIHYENPSLLIESFYFEKDKADRLNSKSSDLQKLINLNIERCEKKIK
ILEGNLKDCDEKEKFQICGEILTANIYALKKGMDKVNLLNYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAKE
QIELTCDELKYLNSVLTSIKNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYLT
LKFASNHDIWMHTKNIPGSHVIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYTEVKNVHKPNGAKPGMVIYYTN
KTIFIDPKEPNLKQI

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32565397, Length=557, Percent_Identity=23.5188509874327, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 67174; Mature: 67043

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIH
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCEEE
FTDIPKKNPMQPPMFCMVLRKYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLII
EECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHH
EIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSIEYIYPPASLKLNPFNFSLKD
HHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCEEECCCCCCHHH
FKDYIKDNNVKLNKTMFSNIFTGVAIPFSREIFYRLERENNLEITLENMDEICVIAKNIF
HHHHHCCCCEEEHHHHHHHHHHCCCCCCCHHHHEEECCCCCCEEEECCCCHHHHHHHHHH
DSIKNKEFYFNCYLEKDTVKDFYCVNLHSLDNLKNIHYENPSLLIESFYFEKDKADRLNS
HHHCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHEEEHHHCCCCHHHHCCC
KSSDLQKLINLNIERCEKKIKILEGNLKDCDEKEKFQICGEILTANIYALKKGMDKVNLL
CHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAKEQIELTCDELKYLNSVLTSI
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHH
KNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCEE
TLKFASNHDIWMHTKNIPGSHVIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYT
EEEEECCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
EVKNVHKPNGAKPGMVIYYTNKTIFIDPKEPNLKQI
HHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC
>Mature Secondary Structure 
ALDGIFLFSMINEMKTKILNGRVDKVTQPEKDEIVLSIKNNRKTYKLLISSSAVYPKIH
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCEEE
FTDIPKKNPMQPPMFCMVLRKYLNSSKIINIRQLDTDRIVLIDFESADEMGFNSIYTLII
EECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHH
EIMGRHSNITLVRERDNLIMDSIKHVTPEINSVRNLYPSIEYIYPPASLKLNPFNFSLKD
HHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCEEECCCCCCHHH
FKDYIKDNNVKLNKTMFSNIFTGVAIPFSREIFYRLERENNLEITLENMDEICVIAKNIF
HHHHHCCCCEEEHHHHHHHHHHCCCCCCCHHHHEEECCCCCCEEEECCCCHHHHHHHHHH
DSIKNKEFYFNCYLEKDTVKDFYCVNLHSLDNLKNIHYENPSLLIESFYFEKDKADRLNS
HHHCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHEEEHHHCCCCHHHHCCC
KSSDLQKLINLNIERCEKKIKILEGNLKDCDEKEKFQICGEILTANIYALKKGMDKVNLL
CHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NYYTNEYMDIKLDPNKNPSDNIQKYFKKYNKLKKTEVAAKEQIELTCDELKYLNSVLTSI
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHH
KNADSYDDIEEIKRELIETGYIKFKKKNNKKFKNTKPLHFISSDGIDIYVGKNNIQNDYL
CCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCEE
TLKFASNHDIWMHTKNIPGSHVIVKNFQGNVPEKTLEEAATLAAFYSKSKDSTKVPVDYT
EEEEECCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
EVKNVHKPNGAKPGMVIYYTNKTIFIDPKEPNLKQI
HHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]