BacMap

Definition	Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession	NC_012563
Length	4,155,278

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The map label for this gene is deaD [H]

Identifier: 226949024

GI number: 226949024

Start: 1989982

End: 1991427

Strand: Direct

Name: deaD [H]

Synonym: CLM_1938

Alternate gene names: 226949024

Gene position: 1989982-1991427 (Clockwise)

Preceding gene: 226949023

Following gene: 226949025

Centisome position: 47.89

GC content: 28.91

Gene sequence:

>1446_bases
ATGAATAAGTTAGGTTTTGAAAATTATGAATTAAGTGACGAAATATTAAAATCCCTGGGGAGACTAGGATATAAAAATCC
TTCTGAAGTGCAAAAACAAGTTATACCATTAATATTAAAGGACAAAGATATTATAGTAAAGTCTGAAACTGGCAGCGGTA
AAACGGCAGCCTTTTCAATACCTATTTGTGAGAAAATAGAGCTAGAAGAAAAAGATCCTCAAGTATTAGTGCTTACCCCT
ACTAGGGAATTGGCTCTTCAAATCAAAGAGGAGATATCAAGCATAGCTTTATATAAAAGATTAAGATGTACAGCGATTTT
TGGTAAGCAGCCTATGAGCCTTCAAAAGAGGGAATTAAAGCAAAGAGTACATTTAGTTGTAGGTACTCCAGGTAGAACTT
TAGATCATATAGAAAGAGAAAATTTAGATTTAAAAAAGATAAAGTATTTTGTTTTAGATGAAGCAGATGAAATGCTTAAT
ATGGGATTTATAGATCAAGTAGAAGCTGTTATAAAAAGATTACCTAAAAATAGAGTAACTATGTTGTTTTCAGCTACTAT
ACCAGAAAAAATAGAGAATCTGTGTAAAAAATATATGAATAATCCCCAAAATATAAACATAAATCCAGAAAATATAACTA
CAGGCACCATAAATCAATGTTATTATGAAGTTGAGGATAAAGATAAGTTTTCTCTTTTACAAAAAATAATATATAAAGAA
GTAGTAGATAATTCTATTATATTTTGTAATACAAGAGAAAAGGTAGATGAAGTATTAAAACATATGAAGAAAAAAGGATT
TAACGCTATTGGTCTGCATGGTGGCATGGAACAAAAAGATAGATTAGAGACTATGAAAAAGTTCAAACAGGGTGAATTTC
AGTTTTTAGTATGTACAGATGTAGCAGCTAGAGGTATTCATATAGAAAATATAAGCCATGTTATAAATTATGAGATGCCT
TATGAAAAAGAAAGTTATGTTCATAGAATAGGGAGAACAGGAAGAGCAGGAAAAGAAGGGGTAGCTATAACATTTATAGA
ACCTAATAAAGTTAGATTTTTAAAAGATATAGAAGATTATATAGAGAAGGAAATACCTAAAAGGAAGGAGCCTTCTTTAG
AAGAAGTAGATAAGGGTAAAAAAGTATTCGAAGAAAATATTAAAAATAGGATTAAAACAAAAGTACCAAAAAATAATAAA
AAGCAAAAGGATATTACTAAAATATATATAAGTGCAGGAAGAAAGAAAAAAATTAGGCCAGGAGATATTGTAGGTGCTAT
TACTAGTATAGAAGGCATCAATGTAGATAATATAGGTATAATAGATATACAGGATAATCACTCTTATGTAGATATACTAG
AAGGAAAAGGAGATATAGTACTTAAAGCTAGTGAAGATATGAAAATAAAAGGAAAAAAAGTAAGAATACAAAGGGCAGTA
AAATAA

Upstream 100 bases:

>100_bases
TTAAAAGTTAAGGGAACTATATAAAGGATTTTATTTAAATTAAGTGAAAATGTATATTTTATAATAAAGAATTATATGAA
ATAAAAATGAGGTTAAATTT

Downstream 100 bases:

>100_bases
ATATAAAAGTTATTCTACTTATTGATTAAATAATACAAGTCAGAATAATTTAATCTATTTATATAATATTTGGGTATTAT
ATAAATAGATTTATTAAGAA

Product: ATP-dependent RNA helicase DeaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MNKLGFENYELSDEILKSLGRLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSIPICEKIELEEKDPQVLVLTP
TRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELKQRVHLVVGTPGRTLDHIERENLDLKKIKYFVLDEADEMLN
MGFIDQVEAVIKRLPKNRVTMLFSATIPEKIENLCKKYMNNPQNININPENITTGTINQCYYEVEDKDKFSLLQKIIYKE
VVDNSIIFCNTREKVDEVLKHMKKKGFNAIGLHGGMEQKDRLETMKKFKQGEFQFLVCTDVAARGIHIENISHVINYEMP
YEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDYIEKEIPKRKEPSLEEVDKGKKVFEENIKNRIKTKVPKNNK
KQKDITKIYISAGRKKKIRPGDIVGAITSIEGINVDNIGIIDIQDNHSYVDILEGKGDIVLKASEDMKIKGKKVRIQRAV
K

Sequences:

>Translated_481_residues
MNKLGFENYELSDEILKSLGRLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSIPICEKIELEEKDPQVLVLTP
TRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELKQRVHLVVGTPGRTLDHIERENLDLKKIKYFVLDEADEMLN
MGFIDQVEAVIKRLPKNRVTMLFSATIPEKIENLCKKYMNNPQNININPENITTGTINQCYYEVEDKDKFSLLQKIIYKE
VVDNSIIFCNTREKVDEVLKHMKKKGFNAIGLHGGMEQKDRLETMKKFKQGEFQFLVCTDVAARGIHIENISHVINYEMP
YEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDYIEKEIPKRKEPSLEEVDKGKKVFEENIKNRIKTKVPKNNK
KQKDITKIYISAGRKKKIRPGDIVGAITSIEGINVDNIGIIDIQDNHSYVDILEGKGDIVLKASEDMKIKGKKVRIQRAV
K
>Mature_481_residues
MNKLGFENYELSDEILKSLGRLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSIPICEKIELEEKDPQVLVLTP
TRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELKQRVHLVVGTPGRTLDHIERENLDLKKIKYFVLDEADEMLN
MGFIDQVEAVIKRLPKNRVTMLFSATIPEKIENLCKKYMNNPQNININPENITTGTINQCYYEVEDKDKFSLLQKIIYKE
VVDNSIIFCNTREKVDEVLKHMKKKGFNAIGLHGGMEQKDRLETMKKFKQGEFQFLVCTDVAARGIHIENISHVINYEMP
YEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDYIEKEIPKRKEPSLEEVDKGKKVFEENIKNRIKTKVPKNNK
KQKDITKIYISAGRKKKIRPGDIVGAITSIEGINVDNIGIIDIQDNHSYVDILEGKGDIVLKASEDMKIKGKKVRIQRAV
K

Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=38.5041551246537, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=36.1878453038674, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI4503529, Length=363, Percent_Identity=38.8429752066116, Blast_Score=252, Evalue=7e-67,
Organism=Homo sapiens, GI83700235, Length=357, Percent_Identity=39.4957983193277, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI169881239, Length=391, Percent_Identity=35.8056265984655, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI13514809, Length=391, Percent_Identity=35.8056265984655, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI301171475, Length=391, Percent_Identity=35.5498721227622, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI87196351, Length=391, Percent_Identity=35.5498721227622, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI301171467, Length=391, Percent_Identity=35.5498721227622, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=34.0659340659341, Blast_Score=241, Evalue=9e-64,
Organism=Homo sapiens, GI164664518, Length=382, Percent_Identity=34.2931937172775, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI41327771, Length=376, Percent_Identity=36.1702127659575, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=37.5350140056022, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI31542656, Length=394, Percent_Identity=36.0406091370558, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI188035877, Length=359, Percent_Identity=35.933147632312, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI38201710, Length=406, Percent_Identity=30.7881773399015, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=32.4175824175824, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI50659095, Length=366, Percent_Identity=37.7049180327869, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=34.4262295081967, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=34.4262295081967, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI21040371, Length=377, Percent_Identity=33.6870026525199, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=32.409972299169, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI222352149, Length=366, Percent_Identity=32.2404371584699, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI4758112, Length=370, Percent_Identity=33.5135135135135, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI18375623, Length=370, Percent_Identity=33.5135135135135, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=34.7222222222222, Blast_Score=222, Evalue=8e-58,
Organism=Homo sapiens, GI13129006, Length=378, Percent_Identity=34.9206349206349, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=34.3589743589744, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=33.8461538461538, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=34.7222222222222, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=34.5108695652174, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=34.5108695652174, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=34.5108695652174, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=34.5714285714286, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI164419743, Length=446, Percent_Identity=28.47533632287, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI51094101, Length=446, Percent_Identity=28.47533632287, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=34.8525469168901, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=33.2386363636364, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=32.3204419889503, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI62241024, Length=351, Percent_Identity=35.042735042735, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=31.8181818181818, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI13514831, Length=370, Percent_Identity=31.0810810810811, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI41327779, Length=360, Percent_Identity=33.8888888888889, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=29.4277929155313, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=29.4277929155313, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=28.428927680798, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=30.5084745762712, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI17505907, Length=397, Percent_Identity=27.455919395466, Blast_Score=169, Evalue=8e-42,
Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=31.6923076923077, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=30.2670623145401, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI256773275, Length=404, Percent_Identity=25, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI154759257, Length=454, Percent_Identity=25.3303964757709, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI20336298, Length=336, Percent_Identity=26.7857142857143, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557365, Length=362, Percent_Identity=23.7569060773481, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=42.7807486631016, Blast_Score=327, Evalue=9e-91,
Organism=Escherichia coli, GI1787605, Length=463, Percent_Identity=35.2051835853132, Blast_Score=313, Evalue=2e-86,
Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=36.3395225464191, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=35.2, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1788930, Length=374, Percent_Identity=34.2245989304813, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI48994977, Length=353, Percent_Identity=24.6458923512748, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=40.1662049861496, Blast_Score=300, Evalue=8e-82,
Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=39.8891966759003, Blast_Score=300, Evalue=1e-81,
Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=40.0544959128065, Blast_Score=295, Evalue=5e-80,
Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=36.7123287671233, Blast_Score=264, Evalue=9e-71,
Organism=Caenorhabditis elegans, GI17552114, Length=376, Percent_Identity=35.3723404255319, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI32565321, Length=386, Percent_Identity=34.9740932642487, Blast_Score=237, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI86570094, Length=346, Percent_Identity=37.2832369942197, Blast_Score=235, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI17510309, Length=387, Percent_Identity=34.625322997416, Blast_Score=224, Evalue=9e-59,
Organism=Caenorhabditis elegans, GI17510307, Length=387, Percent_Identity=34.625322997416, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI71995514, Length=387, Percent_Identity=34.625322997416, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=36.3372093023256, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71982858, Length=376, Percent_Identity=32.4468085106383, Blast_Score=221, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=32.7272727272727, Blast_Score=218, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI71999646, Length=364, Percent_Identity=30.7692307692308, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17509811, Length=358, Percent_Identity=32.6815642458101, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI71999644, Length=364, Percent_Identity=30.7692307692308, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI115532546, Length=375, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI115532548, Length=406, Percent_Identity=32.512315270936, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17537549, Length=372, Percent_Identity=34.6774193548387, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17507945, Length=363, Percent_Identity=34.1597796143251, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI71995718, Length=392, Percent_Identity=31.8877551020408, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=395, Percent_Identity=33.4177215189873, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17553716, Length=370, Percent_Identity=32.4324324324324, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17536099, Length=395, Percent_Identity=31.8987341772152, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17536101, Length=395, Percent_Identity=31.8987341772152, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=31.989247311828, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17507879, Length=393, Percent_Identity=31.2977099236641, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=30.0291545189504, Blast_Score=191, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI17536103, Length=395, Percent_Identity=31.8987341772152, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17552642, Length=374, Percent_Identity=30.7486631016043, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=430, Percent_Identity=30.2325581395349, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=27.0341207349081, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=28.894472361809, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=26.3157894736842, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=383, Percent_Identity=28.7206266318538, Blast_Score=158, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=406, Percent_Identity=27.3399014778325, Blast_Score=148, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17556951, Length=384, Percent_Identity=28.6458333333333, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI71990816, Length=376, Percent_Identity=28.9893617021277, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=27.2189349112426, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=34.9282296650718, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=26.6666666666667, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=345, Percent_Identity=23.1884057971014, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=109, Percent_Identity=44.0366972477064, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17557982, Length=421, Percent_Identity=22.8028503562945, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17566630, Length=332, Percent_Identity=25, Blast_Score=92, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6320224, Length=360, Percent_Identity=37.5, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=37.1830985915493, Blast_Score=253, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6320041, Length=360, Percent_Identity=35.5555555555556, Blast_Score=247, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=35.3723404255319, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6325138, Length=385, Percent_Identity=35.8441558441558, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6322912, Length=361, Percent_Identity=36.2880886426593, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6322323, Length=361, Percent_Identity=36.2880886426593, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=38.4831460674157, Blast_Score=229, Evalue=5e-61,
Organism=Saccharomyces cerevisiae, GI6324778, Length=384, Percent_Identity=32.2916666666667, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6324620, Length=368, Percent_Identity=33.695652173913, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=353, Percent_Identity=35.1274787535411, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=32.6704545454545, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=33.509234828496, Blast_Score=203, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=33.6088154269972, Blast_Score=200, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=31.4207650273224, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6320449, Length=397, Percent_Identity=31.2342569269521, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6321111, Length=421, Percent_Identity=31.353919239905, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=31.1004784688995, Blast_Score=183, Evalue=6e-47,
Organism=Saccharomyces cerevisiae, GI6320400, Length=405, Percent_Identity=32.5925925925926, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6319714, Length=360, Percent_Identity=30.5555555555556, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6323306, Length=456, Percent_Identity=28.2894736842105, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=429, Percent_Identity=29.1375291375291, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6320173, Length=242, Percent_Identity=33.4710743801653, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6324366, Length=350, Percent_Identity=26.2857142857143, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=25.3101736972705, Blast_Score=103, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6322876, Length=201, Percent_Identity=32.8358208955224, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323844, Length=371, Percent_Identity=22.3719676549865, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=39.612188365651, Blast_Score=285, Evalue=4e-77,
Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=39.8891966759003, Blast_Score=261, Evalue=7e-70,
Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=39.8891966759003, Blast_Score=261, Evalue=7e-70,
Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=39.8891966759003, Blast_Score=261, Evalue=7e-70,
Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=39.8891966759003, Blast_Score=261, Evalue=7e-70,
Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=36.2397820163488, Blast_Score=252, Evalue=3e-67,
Organism=Drosophila melanogaster, GI24584399, Length=355, Percent_Identity=37.1830985915493, Blast_Score=248, Evalue=8e-66,
Organism=Drosophila melanogaster, GI24583279, Length=380, Percent_Identity=34.4736842105263, Blast_Score=241, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24583281, Length=380, Percent_Identity=34.4736842105263, Blast_Score=241, Evalue=8e-64,
Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=35.7142857142857, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24642151, Length=352, Percent_Identity=36.6477272727273, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI24584994, Length=391, Percent_Identity=35.0383631713555, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=34.7945205479452, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24644483, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI17985987, Length=395, Percent_Identity=35.4430379746835, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI281361218, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24644481, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24644487, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI45551833, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24644485, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24644479, Length=390, Percent_Identity=33.0769230769231, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=33.7765957446808, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI21356161, Length=371, Percent_Identity=33.9622641509434, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI17977678, Length=433, Percent_Identity=30.715935334873, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24581954, Length=378, Percent_Identity=34.6560846560847, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24581952, Length=378, Percent_Identity=34.6560846560847, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24581956, Length=378, Percent_Identity=34.6560846560847, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24662330, Length=348, Percent_Identity=34.4827586206897, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI28575014, Length=364, Percent_Identity=31.043956043956, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI17136814, Length=368, Percent_Identity=34.5108695652174, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=34.1935483870968, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI17647335, Length=355, Percent_Identity=29.0140845070423, Blast_Score=185, Evalue=8e-47,
Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=29.6551724137931, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=30, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=28.5714285714286, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=28.5714285714286, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=27.2727272727273, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI18859659, Length=421, Percent_Identity=27.0783847980998, Blast_Score=162, Evalue=7e-40,
Organism=Drosophila melanogaster, GI28571338, Length=421, Percent_Identity=27.0783847980998, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=26.4, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24668515, Length=335, Percent_Identity=30.1492537313433, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=27.1641791044776, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=27.9236276849642, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24640164, Length=376, Percent_Identity=22.6063829787234, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21358123, Length=373, Percent_Identity=22.5201072386059, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24646066, Length=367, Percent_Identity=24.7956403269755, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 55203; Mature: 55203

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00563 STATHMIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLGFENYELSDEILKSLGRLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSI
CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCEEEEEECCCCCCEEEEEC
PICEKIELEEKDPQVLVLTPTRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELK
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
QRVHLVVGTPGRTLDHIERENLDLKKIKYFVLDEADEMLNMGFIDQVEAVIKRLPKNRVT
HHEEEEECCCCCHHHHHHHCCCCHHHHHEEEECCHHHHHCCCCHHHHHHHHHHCCCCCEE
MLFSATIPEKIENLCKKYMNNPQNININPENITTGTINQCYYEVEDKDKFSLLQKIIYKE
EEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHH
VVDNSIIFCNTREKVDEVLKHMKKKGFNAIGLHGGMEQKDRLETMKKFKQGEFQFLVCTD
HHCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC
VAARGIHIENISHVINYEMPYEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDY
HHHCCEEHCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH
IEKEIPKRKEPSLEEVDKGKKVFEENIKNRIKTKVPKNNKKQKDITKIYISAGRKKKIRP
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCC
GDIVGAITSIEGINVDNIGIIDIQDNHSYVDILEGKGDIVLKASEDMKIKGKKVRIQRAV
CHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEECCCEEEEEECC
K
C
>Mature Secondary Structure
MNKLGFENYELSDEILKSLGRLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSI
CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCEEEEEECCCCCCEEEEEC
PICEKIELEEKDPQVLVLTPTRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELK
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
QRVHLVVGTPGRTLDHIERENLDLKKIKYFVLDEADEMLNMGFIDQVEAVIKRLPKNRVT
HHEEEEECCCCCHHHHHHHCCCCHHHHHEEEECCHHHHHCCCCHHHHHHHHHHCCCCCEE
MLFSATIPEKIENLCKKYMNNPQNININPENITTGTINQCYYEVEDKDKFSLLQKIIYKE
EEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHH
VVDNSIIFCNTREKVDEVLKHMKKKGFNAIGLHGGMEQKDRLETMKKFKQGEFQFLVCTD
HHCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC
VAARGIHIENISHVINYEMPYEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDY
HHHCCEEHCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH
IEKEIPKRKEPSLEEVDKGKKVFEENIKNRIKTKVPKNNKKQKDITKIYISAGRKKKIRP
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCC
GDIVGAITSIEGINVDNIGIIDIQDNHSYVDILEGKGDIVLKASEDMKIKGKKVRIQRAV
CHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEECCCEEEEEECC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10481020 [H]