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The map label for this gene is yitL [H]

Identifier: 226949023

GI number: 226949023

Start: 1988966

End: 1989802

Strand: Direct

Name: yitL [H]

Synonym: CLM_1937

Alternate gene names: 226949023

Gene position: 1988966-1989802 (Clockwise)

Preceding gene: 226949022

Following gene: 226949024

Centisome position: 47.87

GC content: 29.87

Gene sequence:

>837_bases
ATGATAAAGTTAGGTGAAATACAAAAGTTAGAAATAATAAGAGAGGCTCCTATGGGAGTATATTTAAATTCTAAAGAGGA
TAAAAGTGAAAATGATATATTATTACCTGGAAAGCAAGTTCCTAAAGATGCTAAGATAGGTGATGAAGTAGAAGTCTTTG
TTTATAGAGATTCAGAAGATAGAATGATAGCTACCATAAACAGACCTAAAATAACTATTGGAGAGATAGCTCCTTTAAAG
GTTATAGAAAAAACTAAAATGGGAGCTTTTTTAGACTGGGGGCTAGAGAGAGACTTATTTTTGCCCTTTAAAGAACAAAC
TTACGGTATACAAGAAGGAAAGGAATGCTTAGTTTATTTATACATAGACAAAAGCGATAGACTATGCGCTAGTATGAATG
TATACAGAGTTTTAAGCACAGAATCTCCTTATAAAGAAAATGATGAAGTTAAGGGGTTCATATATGATATAAAAAAAGAA
ATAGGTGCTTTTGTTGCTGTAGACGATGAATACCATGGATTAATACCTAAAAATGAATTGTATGAAAAGTTTAGATATGG
AGATATAGTGGAGGCTAGAGTAACTAAAGTAAAGGAAGATGGCAAACTAGATTTAAGCATTAGAAAAAAAGCATACAAAC
AAATGGATGAAGATGCAGATACTATTTTAGAAAAATTAAATTCTAATGGAGGTAAGCTTTATTTAAATGATAATAGTGAT
CCAGTAGCTATAAAGGAACTTTTAAGTATGAGTAAAAATGCATTTAAAAGAGCAGTAGGAAGACTTTTAAAAGAAGGTAA
AATAGAATTTATTGAAAATGGCATTAAGCTTAAATAA

Upstream 100 bases:

>100_bases
AAATTGTGGTAAATAATTAATAATTTTAAAAATTATTGTTTAATATAAATAGATTATTTTACATAAATAGTATTAAATTA
ATTAATAAAGAAGGTGCAGT

Downstream 100 bases:

>100_bases
AAGAAAAAGCATCTGCTATATTGGATATAACCAAAAGTAGATGCTTTTATTTAATTAAACTAAGTAATATTCTTTGTAGT
TAAAAGTTAAGGGAACTATA

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSEDRMIATINRPKITIGEIAPLK
VIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGKECLVYLYIDKSDRLCASMNVYRVLSTESPYKENDEVKGFIYDIKKE
IGAFVAVDDEYHGLIPKNELYEKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDADTILEKLNSNGGKLYLNDNSD
PVAIKELLSMSKNAFKRAVGRLLKEGKIEFIENGIKLK

Sequences:

>Translated_278_residues
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSEDRMIATINRPKITIGEIAPLK
VIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGKECLVYLYIDKSDRLCASMNVYRVLSTESPYKENDEVKGFIYDIKKE
IGAFVAVDDEYHGLIPKNELYEKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDADTILEKLNSNGGKLYLNDNSD
PVAIKELLSMSKNAFKRAVGRLLKEGKIEFIENGIKLK
>Mature_278_residues
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSEDRMIATINRPKITIGEIAPLK
VIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGKECLVYLYIDKSDRLCASMNVYRVLSTESPYKENDEVKGFIYDIKKE
IGAFVAVDDEYHGLIPKNELYEKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDADTILEKLNSNGGKLYLNDNSD
PVAIKELLSMSKNAFKRAVGRLLKEGKIEFIENGIKLK

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31834; Mature: 31834

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSED
CCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCC
RMIATINRPKITIGEIAPLKVIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGKECLVYL
CEEEEECCCEEEECCCCCHHHHHHHHCCCHHHCCCCCCEECCCHHHHCCCCCCCEEEEEE
YIDKSDRLCASMNVYRVLSTESPYKENDEVKGFIYDIKKEIGAFVAVDDEYHGLIPKNEL
EECCCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCHHHH
YEKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDADTILEKLNSNGGKLYLNDNSD
HHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCC
PVAIKELLSMSKNAFKRAVGRLLKEGKIEFIENGIKLK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSED
CCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCC
RMIATINRPKITIGEIAPLKVIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGKECLVYL
CEEEEECCCEEEECCCCCHHHHHHHHCCCHHHCCCCCCEECCCHHHHCCCCCCCEEEEEE
YIDKSDRLCASMNVYRVLSTESPYKENDEVKGFIYDIKKEIGAFVAVDDEYHGLIPKNEL
EECCCCCEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCHHHH
YEKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDADTILEKLNSNGGKLYLNDNSD
HHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCC
PVAIKELLSMSKNAFKRAVGRLLKEGKIEFIENGIKLK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]