| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948854
Identifier: 226948854
GI number: 226948854
Start: 1795344
End: 1795832
Strand: Reverse
Name: 226948854
Synonym: CLM_1756
Alternate gene names: NA
Gene position: 1795832-1795344 (Counterclockwise)
Preceding gene: 226948856
Following gene: 226948852
Centisome position: 43.22
GC content: 33.33
Gene sequence:
>489_bases ATGGATTTAATTAACACAAAAGAATTTACAAAAGAAGAACTTCTTGATAAAGTACAAGCTGTAGCTGAAAATTATTTTAG AAGTGGTACTTTTTTTTGCAGTGAAGCAGTAGTTCAAACAATTAACGAAGTATTAGGAAAACCTTATGATGAAAGCATAG TTAAAATGGCAAGTGGATTTCCTATAGGACTTGGCAAATCAGGATGTCTATGTGGTGCTGTTTCAGGTGGACAAATGGCC CTAGGTATGGTATATGGTAGAGTTGAAGGTGAAGCTATGAATGAAAAGATGTTTAAAAAATCTAGCAGCCTTCATGATTA TATAAAGAATGAATACAAATCGACTTGTTGTAGAGTAATAACAAGAGAATGGGCTGGAGACAACTTTAAAAGTCCAGAAA GAAAAAAGCACTGCATAACAATCACTGGAAAAGTTGCAAGATGGGTTGCAAATGAGCTTATTGAAGACGAACATATTAAA GTAAAATAA
Upstream 100 bases:
>100_bases TATTGGTAAGTTTAAAATATATAACTTATAATAAAAGTTGCGCATTTAATTTAAATTATAATATTAGTGAGTTTTTATAA GTATGTAGGAGGAATGTGTG
Downstream 100 bases:
>100_bases TAACATAAATTTCGAAATATACAAGCACTTACAACCTGTGAATATCTTACATAAAATATGATTTTTTTTACTTGTTCTTA TATTTCATGTATATTTTTTA
Product: redox family protein
Products: NA
Alternate protein names: Redox Family Protein; C-GCAxxG-C-C Redox-Active Protein; C_gcaxxg_c_c Family Protein; Redox-Active Protein C_GCAxxG_C_C Family
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MDLINTKEFTKEELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGFPIGLGKSGCLCGAVSGGQMA LGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVITREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIK VK
Sequences:
>Translated_162_residues MDLINTKEFTKEELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGFPIGLGKSGCLCGAVSGGQMA LGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVITREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIK VK >Mature_162_residues MDLINTKEFTKEELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGFPIGLGKSGCLCGAVSGGQMA LGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVITREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIK VK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18116; Mature: 18116
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLINTKEFTKEELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGF CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC PIGLGKSGCLCGAVSGGQMALGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVI CCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIKVK HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDLINTKEFTKEELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGF CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC PIGLGKSGCLCGAVSGGQMALGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVI CCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIKVK HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA