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The map label for this gene is 226948753

Identifier: 226948753

GI number: 226948753

Start: 1701586

End: 1701948

Strand: Direct

Name: 226948753

Synonym: CLM_1654

Alternate gene names: NA

Gene position: 1701586-1701948 (Clockwise)

Preceding gene: 226948752

Following gene: 226948754

Centisome position: 40.95

GC content: 27.82

Gene sequence:

>363_bases
GTGTGTTCATGTAAAGATAAGAGATATAAAGAAGAAGATAAATACAAGAAGGATACTAAAGAAAAACAATTCTATTCTAG
CGAAGAGTGGAGCATAATGAGAGACAAGGCGAAGGATAAGTACAAAGGAATAGATATATATAGTTATTATGTACTAGGCA
TAATTGAATACGGACAAACAGTTCATCATATAGAACCAATAAAAAAGAATTGGAATAAGAGATTAGATATTAATAATCTT
ATATATCTTACTGAAAGCAATCATAAGAAGCTACATTATAGAATGGATCATGGAGAAGAACAGGAAGTTATTAAAGAACT
ATACGAACTTATAAAGAAATTTGAGAAAGAAATGATAAATTAA

Upstream 100 bases:

>100_bases
AGAAGTAGAATTAAAAGTTAAGATGATGGAAGGGTTGGAAGAATAAATACCTATTTATAAAAGGTGTAGCAGATGTAATA
AAAGAATACCTTCGGGAACT

Downstream 100 bases:

>100_bases
TATAATAAATATTTTTTATTTATTATAAAGCTATAGGGGGTATAGAAAAATGTTTTGAAAGATCTCTTCTAGACCGCATC
CCTAATGTTCTTTCCGCAAA

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: Gp50 Protein

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MCSCKDKRYKEEDKYKKDTKEKQFYSSEEWSIMRDKAKDKYKGIDIYSYYVLGIIEYGQTVHHIEPIKKNWNKRLDINNL
IYLTESNHKKLHYRMDHGEEQEVIKELYELIKKFEKEMIN

Sequences:

>Translated_120_residues
MCSCKDKRYKEEDKYKKDTKEKQFYSSEEWSIMRDKAKDKYKGIDIYSYYVLGIIEYGQTVHHIEPIKKNWNKRLDINNL
IYLTESNHKKLHYRMDHGEEQEVIKELYELIKKFEKEMIN
>Mature_120_residues
MCSCKDKRYKEEDKYKKDTKEKQFYSSEEWSIMRDKAKDKYKGIDIYSYYVLGIIEYGQTVHHIEPIKKNWNKRLDINNL
IYLTESNHKKLHYRMDHGEEQEVIKELYELIKKFEKEMIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14809; Mature: 14809

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSCKDKRYKEEDKYKKDTKEKQFYSSEEWSIMRDKAKDKYKGIDIYSYYVLGIIEYGQT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
VHHIEPIKKNWNKRLDINNLIYLTESNHKKLHYRMDHGEEQEVIKELYELIKKFEKEMIN
HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCSCKDKRYKEEDKYKKDTKEKQFYSSEEWSIMRDKAKDKYKGIDIYSYYVLGIIEYGQT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
VHHIEPIKKNWNKRLDINNLIYLTESNHKKLHYRMDHGEEQEVIKELYELIKKFEKEMIN
HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA