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The map label for this gene is lytB [H]

Identifier: 226948631

GI number: 226948631

Start: 1585278

End: 1586516

Strand: Direct

Name: lytB [H]

Synonym: CLM_1526

Alternate gene names: 226948631

Gene position: 1585278-1586516 (Clockwise)

Preceding gene: 226948630

Following gene: 226948632

Centisome position: 38.15

GC content: 27.85

Gene sequence:

>1239_bases
TTGATTATAAATGAAAATTTAAATAAAATATATAAAATAGTTTTAACTATTATTCTTGTAATTTCCTTTTTTCTTATATG
TTTATTGTTTTTTTATAAACCTAATTATTATAAAAATAAAGTCGATATAAATAACAAAAGCACTATAAAAAACGAAAATA
AATACCAAAGAGTTACTGCAAATACAGTCAGGATAGAGGGAAAGGATTTATATGAGACTTGTACATCTATATCACAAATA
GTTTATCCAGCTACTTCTAAAGAAGATAGACCTAATGCAGTTATATTAGTTAGAAGTGATAAAATAGAAGATGCTATGTT
AGCCGCTAGAGTTTCTCATGATCCAATAAATGCTCCTATACTTTTTACTAAGAAAAATAGTATTCCAGAAAGTACTTTAA
AGGAAATAGAAAGACTAAATCCTGAAGGATTATTTTTAGATAGTAATGTAAAAGTTATATTGATAGGTGATATGGGAAAG
GATATAGAAAATACTTTGAATAAAAAAAATTTAAAATATAGGCATATAAAAGGAAAAGATATTTACGATTTAAGTCTTAA
TGTTGACAACTATTTGGCTGCATTCCGTGGAAATCATAAGGATGTAGTGATAATAGCACCTATAGAAAAACCTGAATATT
CTCTAGCACAAGCTTCTTGGAATGCTCATAATGGAGATGGATTTTTTTTCGTAGAAAAAAATAAAGTACCAGAATCCGTT
AAAAACGCTCTTAAAGCTAGATATGGAGGATCCTATATTTATATATTAGGAGATAAATTTCATATATCCAATAAGGTTAA
AAAGGAACTTGCCAAATATGGTCATGTAGAGAGGATCCCTGGTGGAGAGAATATATATAATCAAGCAGTCTCTTTTGCAA
CTTATAAGGATGTAGGTAAAAATTTTTCATGCTGGTTTAGTAAAAAAAGTAGAGATTTTGGTTGGGGAATTACACAACCA
GGGCATAATTTTATATTTGTAAATCCTGATAATTGGCAGGTAGCAGTAGCTTCATCCATTTTATCACATAAGGCAAAGCA
AGGTCCCATGCTTCTAGTATATAAAAATTCTATACCAGAAAAATTAAGAGATTATCTATATAATGTAAAACCAAGTTACA
TCTCTTCACAGGAAATTAATAATAATCATGGATGGATAATAGGAAATAGTGATTATATTAGTGATATGAATCAAGATAAA
ATTGATAGTCTTTTAGAAAGTGAAAGGAGTAATAGATAA

Upstream 100 bases:

>100_bases
CCTAATTGGATTTTAGTTAGAAATGGTAAGAAAATGGGTACTTTATAATAAATTATTTTTCTTTACTAAAAATTTATAGG
TATGAAAAAGAGGTGATAGA

Downstream 100 bases:

>100_bases
TGCCGTCAACGGATACTGAATTTCAAGAACAGATGCAACAACAAATGAAACAAAGGCTTGAAAACTTACCTAGATTTACT
TATAAGGTTACAAGATTTTT

Product: putative cell-surface protein

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIINENLNKIYKIVLTIILVISFFLICLLFFYKPNYYKNKVDINNKSTIKNENKYQRVTANTVRIEGKDLYETCTSISQI
VYPATSKEDRPNAVILVRSDKIEDAMLAARVSHDPINAPILFTKKNSIPESTLKEIERLNPEGLFLDSNVKVILIGDMGK
DIENTLNKKNLKYRHIKGKDIYDLSLNVDNYLAAFRGNHKDVVIIAPIEKPEYSLAQASWNAHNGDGFFFVEKNKVPESV
KNALKARYGGSYIYILGDKFHISNKVKKELAKYGHVERIPGGENIYNQAVSFATYKDVGKNFSCWFSKKSRDFGWGITQP
GHNFIFVNPDNWQVAVASSILSHKAKQGPMLLVYKNSIPEKLRDYLYNVKPSYISSQEINNNHGWIIGNSDYISDMNQDK
IDSLLESERSNR

Sequences:

>Translated_412_residues
MIINENLNKIYKIVLTIILVISFFLICLLFFYKPNYYKNKVDINNKSTIKNENKYQRVTANTVRIEGKDLYETCTSISQI
VYPATSKEDRPNAVILVRSDKIEDAMLAARVSHDPINAPILFTKKNSIPESTLKEIERLNPEGLFLDSNVKVILIGDMGK
DIENTLNKKNLKYRHIKGKDIYDLSLNVDNYLAAFRGNHKDVVIIAPIEKPEYSLAQASWNAHNGDGFFFVEKNKVPESV
KNALKARYGGSYIYILGDKFHISNKVKKELAKYGHVERIPGGENIYNQAVSFATYKDVGKNFSCWFSKKSRDFGWGITQP
GHNFIFVNPDNWQVAVASSILSHKAKQGPMLLVYKNSIPEKLRDYLYNVKPSYISSQEINNNHGWIIGNSDYISDMNQDK
IDSLLESERSNR
>Mature_412_residues
MIINENLNKIYKIVLTIILVISFFLICLLFFYKPNYYKNKVDINNKSTIKNENKYQRVTANTVRIEGKDLYETCTSISQI
VYPATSKEDRPNAVILVRSDKIEDAMLAARVSHDPINAPILFTKKNSIPESTLKEIERLNPEGLFLDSNVKVILIGDMGK
DIENTLNKKNLKYRHIKGKDIYDLSLNVDNYLAAFRGNHKDVVIIAPIEKPEYSLAQASWNAHNGDGFFFVEKNKVPESV
KNALKARYGGSYIYILGDKFHISNKVKKELAKYGHVERIPGGENIYNQAVSFATYKDVGKNFSCWFSKKSRDFGWGITQP
GHNFIFVNPDNWQVAVASSILSHKAKQGPMLLVYKNSIPEKLRDYLYNVKPSYISSQEINNNHGWIIGNSDYISDMNQDK
IDSLLESERSNR

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 47098; Mature: 47098

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINENLNKIYKIVLTIILVISFFLICLLFFYKPNYYKNKVDINNKSTIKNENKYQRVTA
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEE
NTVRIEGKDLYETCTSISQIVYPATSKEDRPNAVILVRSDKIEDAMLAARVSHDPINAPI
EEEEECCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCE
LFTKKNSIPESTLKEIERLNPEGLFLDSNVKVILIGDMGKDIENTLNKKNLKYRHIKGKD
EEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHHHCCCEEEEECCCE
IYDLSLNVDNYLAAFRGNHKDVVIIAPIEKPEYSLAQASWNAHNGDGFFFVEKNKVPESV
EEEEEECHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCEEEEEECCCCCHHH
KNALKARYGGSYIYILGDKFHISNKVKKELAKYGHVERIPGGENIYNQAVSFATYKDVGK
HHHHHHHCCCEEEEEECCEEECHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCC
NFSCWFSKKSRDFGWGITQPGHNFIFVNPDNWQVAVASSILSHKAKQGPMLLVYKNSIPE
CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCH
KLRDYLYNVKPSYISSQEINNNHGWIIGNSDYISDMNQDKIDSLLESERSNR
HHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIINENLNKIYKIVLTIILVISFFLICLLFFYKPNYYKNKVDINNKSTIKNENKYQRVTA
CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEE
NTVRIEGKDLYETCTSISQIVYPATSKEDRPNAVILVRSDKIEDAMLAARVSHDPINAPI
EEEEECCCHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCE
LFTKKNSIPESTLKEIERLNPEGLFLDSNVKVILIGDMGKDIENTLNKKNLKYRHIKGKD
EEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHHHCCCEEEEECCCE
IYDLSLNVDNYLAAFRGNHKDVVIIAPIEKPEYSLAQASWNAHNGDGFFFVEKNKVPESV
EEEEEECHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCEEEEEECCCCCHHH
KNALKARYGGSYIYILGDKFHISNKVKKELAKYGHVERIPGGENIYNQAVSFATYKDVGK
HHHHHHHCCCEEEEEECCEEECHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCC
NFSCWFSKKSRDFGWGITQPGHNFIFVNPDNWQVAVASSILSHKAKQGPMLLVYKNSIPE
CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCH
KLRDYLYNVKPSYISSQEINNNHGWIIGNSDYISDMNQDKIDSLLESERSNR
HHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]