| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226948630
Identifier: 226948630
GI number: 226948630
Start: 1583354
End: 1585225
Strand: Direct
Name: 226948630
Synonym: CLM_1525
Alternate gene names: NA
Gene position: 1583354-1585225 (Clockwise)
Preceding gene: 226948629
Following gene: 226948631
Centisome position: 38.1
GC content: 29.01
Gene sequence:
>1872_bases ATGAAAAAGCTATCCACAGGTATAGCTGTATTTTTATGTACAATATTAATTTTAGGGCAGATTAGAATTGTTAAAAATGC TATTTTCCCTAGTGGAATAAAACATGAAAATAATAGGATTCATCTAAATACAGGAAACACTATTAGAGTTTCTGGAAAAT CTTCAAAAGAGATAGGTACTAAAGTTACAGATATATTATTTCCAGCTTTCAACTATGATAGTAAGCCTAACGGATTAATC ATTTACAAGGGAGATAATTGGAAGGATATATTAGCTTTAATGCCCCTTGTTAAAAAATATAATATCACTATAATACCTTT CAATGAAAAAGATGAAAGCTCTCTTTTAGATTATATAAATAAATTAGAGCCAAAGGGTATTCCAAAATTAAATAATGCAC AAGTTGTTATTTGTGGTGATAACATAAATACATTAAAAAACAATTTAGAAAGAAAAGGTATAAGGGTAACTAACATAAAT TATAAAGATACAAATAGCCTTTTGGAGAAAGTCTATAATAGTGTTTTTTCTAATTCTGAAAAATGCTATGGCTATATAGT TTCAGATGAGGATCCGTTAATGACTGTTCCAGTAGCTACCTGGATAGTTCAAAATGGGGGGATACCATTGTATTTAAATA ATGAAAAGAAGCTTTATAGTTCTTCAAAAAAAATATTGCCTAATATAAGTAAGATATATGTAATTGGAAAGAAAAATAAT GTTGATGAGGAAGCTATTAAATCTTTAAAAGTACCTGTGCAGAAAGTTTATGGATATAACCCTGAAAATTTTGCCATCAA CTTTGCTAAGTTTTATGATAGAGAAGAAGGTTTTGGGTGGCATAGCAATAGAAGTAGAGATGATAGCAATCACAATTTTA TATTATGCTCTAAGGAAGAATCATTAATGGCTTTAGTAGGAAGTCAACTTGCACTTAAAGGAAAAGTAGGACCAATTCTT TGGACGAATAAGAATTATTTATCTCCTCTAACAGAAAACTACCTATGGAGAATGAAGCCTAATTATTGGGTAACTGCAGC GGAAGGACCTTATAATAGTTTGTGGGTAATGGGTAATGAAGATATATTACCTTTTTCAATTCAAAGTAGGGTTGATTATA CTCAAGAAATTCAACCTTATAAAACTATGGGGGACCAGGCAGTTAGCGGATTAGATGGTATTTCTATAATATTTAGTTTA ATATCCATACTAGGTGCTATATGGGTTTCTATTCATTTATATCTTAGAATGAAAAAATTAAGTATATTAATAAAATTTAT GTGGATACTTACAGTACTAGTTTTAGGGCCTTTAGGAATATGGTTTTATGTAATATCTTATATAAATTCTCCTTGGATAA AGATTAACGAAAAGATCGTGTATCTCAGGTCTTTATGGAAACAAACCTCTGTAGCAACTTTATCTGGATTAGCCTTTGGA GCGTCTAGCATAATTGTAGTAAATTATATATTAACGTATATAGGGTCACCATTAATTTCTTTCTATGCTAGATATGGAGG CTATTTATTAGGTAATCCTATGATAATAAAAATGATAATATCCTACTTAATAGCTTTTTTATTAGATTTATTTGTTTTTA TGCCTACTATATTAATAGAAATGAAGAGTAGCAAATATAAAGATGCGGTAAAAGAATCATTACTTTTAGTTTTTATTTCT ATTACATCAATTTCAGTTGGAATGATGCTAAGTATGTGGTGGTTTAATATGTCTTATTCTCCTAGCATACTTCGTGAAGA TAATATACTATGGTTTGGCTTTATGTTTTTATCAGCATTCATAGGATTTTTAATCGCATATATTCCTAATTGGATTTTAG TTAGAAATGGTAAGAAAATGGGTACTTTATAA
Upstream 100 bases:
>100_bases ATGAAATCTTCTCATGCTTTGACGTATTAATTTTAAATAAAAAGGAAATATTAATACATAGTTATATTTATTTAATAAGT AGTAATGGAGGGGATCTTAC
Downstream 100 bases:
>100_bases TAAATTATTTTTCTTTACTAAAAATTTATAGGTATGAAAAAGAGGTGATAGATTGATTATAAATGAAAATTTAAATAAAA TATATAAAATAGTTTTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; ArsR Type Transcriptional Regulator; Cell-Surface Protein; Multicopper Oxidase Domain; Lipoprotein
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MKKLSTGIAVFLCTILILGQIRIVKNAIFPSGIKHENNRIHLNTGNTIRVSGKSSKEIGTKVTDILFPAFNYDSKPNGLI IYKGDNWKDILALMPLVKKYNITIIPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNIN YKDTNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGIPLYLNNEKKLYSSSKKILPNISKIYVIGKKNN VDEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEESLMALVGSQLALKGKVGPIL WTNKNYLSPLTENYLWRMKPNYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSL ISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYVISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFIS ITSISVGMMLSMWWFNMSYSPSILREDNILWFGFMFLSAFIGFLIAYIPNWILVRNGKKMGTL
Sequences:
>Translated_623_residues MKKLSTGIAVFLCTILILGQIRIVKNAIFPSGIKHENNRIHLNTGNTIRVSGKSSKEIGTKVTDILFPAFNYDSKPNGLI IYKGDNWKDILALMPLVKKYNITIIPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNIN YKDTNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGIPLYLNNEKKLYSSSKKILPNISKIYVIGKKNN VDEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEESLMALVGSQLALKGKVGPIL WTNKNYLSPLTENYLWRMKPNYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSL ISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYVISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFIS ITSISVGMMLSMWWFNMSYSPSILREDNILWFGFMFLSAFIGFLIAYIPNWILVRNGKKMGTL >Mature_623_residues MKKLSTGIAVFLCTILILGQIRIVKNAIFPSGIKHENNRIHLNTGNTIRVSGKSSKEIGTKVTDILFPAFNYDSKPNGLI IYKGDNWKDILALMPLVKKYNITIIPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNIN YKDTNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGIPLYLNNEKKLYSSSKKILPNISKIYVIGKKNN VDEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEESLMALVGSQLALKGKVGPIL WTNKNYLSPLTENYLWRMKPNYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSL ISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYVISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFIS ITSISVGMMLSMWWFNMSYSPSILREDNILWFGFMFLSAFIGFLIAYIPNWILVRNGKKMGTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70837; Mature: 70837
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSTGIAVFLCTILILGQIRIVKNAIFPSGIKHENNRIHLNTGNTIRVSGKSSKEIGT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCCCHHHCC KVTDILFPAFNYDSKPNGLIIYKGDNWKDILALMPLVKKYNITIIPFNEKDESSLLDYIN HHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH KLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNINYKDTNSLLEKVYNSVFSNSE HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCC KCYGYIVSDEDPLMTVPVATWIVQNGGIPLYLNNEKKLYSSSKKILPNISKIYVIGKKNN CEEEEEECCCCCEEEEEHEEEEEECCCEEEEECCCHHHHCCCHHHCCCCEEEEEEECCCC VDEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEE CCHHHHHHHCCCHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC SLMALVGSQLALKGKVGPILWTNKNYLSPLTENYLWRMKPNYWVTAAEGPYNSLWVMGNE HHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCEEEECCCEEEEECCCCCCEEEEECCC DILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSLISILGAIWVSIHLYLRMKKL CCCCEEHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SILIKFMWILTVLVLGPLGIWFYVISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHC ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIE CCHHHHHHHHHHHHCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKSSKYKDAVKESLLLVFISITSISVGMMLSMWWFNMSYSPSILREDNILWFGFMFLSAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEHHHHHHHHH IGFLIAYIPNWILVRNGKKMGTL HHHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure MKKLSTGIAVFLCTILILGQIRIVKNAIFPSGIKHENNRIHLNTGNTIRVSGKSSKEIGT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECCCCCHHHCC KVTDILFPAFNYDSKPNGLIIYKGDNWKDILALMPLVKKYNITIIPFNEKDESSLLDYIN HHHHHHEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH KLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNINYKDTNSLLEKVYNSVFSNSE HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCC KCYGYIVSDEDPLMTVPVATWIVQNGGIPLYLNNEKKLYSSSKKILPNISKIYVIGKKNN CEEEEEECCCCCEEEEEHEEEEEECCCEEEEECCCHHHHCCCHHHCCCCEEEEEEECCCC VDEEAIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWHSNRSRDDSNHNFILCSKEE CCHHHHHHHCCCHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC SLMALVGSQLALKGKVGPILWTNKNYLSPLTENYLWRMKPNYWVTAAEGPYNSLWVMGNE HHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCEEEECCCEEEEECCCCCCEEEEECCC DILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFSLISILGAIWVSIHLYLRMKKL CCCCEEHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SILIKFMWILTVLVLGPLGIWFYVISYINSPWIKINEKIVYLRSLWKQTSVATLSGLAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHC ASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIKMIISYLIAFLLDLFVFMPTILIE CCHHHHHHHHHHHHCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKSSKYKDAVKESLLLVFISITSISVGMMLSMWWFNMSYSPSILREDNILWFGFMFLSAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEHHHHHHHHH IGFLIAYIPNWILVRNGKKMGTL HHHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA