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The map label for this gene is rbr [H]

Identifier: 226948605

GI number: 226948605

Start: 1554590

End: 1555177

Strand: Direct

Name: rbr [H]

Synonym: CLM_1500

Alternate gene names: 226948605

Gene position: 1554590-1555177 (Clockwise)

Preceding gene: 226948601

Following gene: 226948606

Centisome position: 37.41

GC content: 31.8

Gene sequence:

>588_bases
ATGAAATCATTAAGAGGTACAAAAACAGCAGAAAATTTATTAAAATCTTTTGCAGGGGAATCCCAGGCTAGAGGAAGATA
TACTTATTATGCTAGTGTAGCTAGAAAAGAAGGTTTTATACAAATTTCAAACATTTTTATAGAAACAGCAGAACAAGAAA
GGGAACACGCAAAAAGATTTTATAAATTTTTAAAGGAAGATCTTCAAGGTGATGCCATTGAAATTACTGCTTCATATCCA
GTTGCATTATATGATAATACTGCAGATAACTTAAAGGCAGCAGCTTCCGGTGAAAATGAAGAATGGACAGAATTATATCC
ATCATTTGCAAAGGTAGCAAGAGAAGAAGGTTTCCAAGAAGTTGCAGTAGCTTACGATATGATATCAAAAGTAGAAAAAG
AACATGAAAAAAGATATCTTAAACTATTAGAAAATGTGGAAAATGATAAAGTATTTAAAAAGGATGAAAAAGTACTTTGG
AAATGCAGTAATTGTGGATTTATCTATGAGGGAACTGCAGCACCAGAAAAATGCCCATCATGCTTGCATCCAAAATCTTA
TTTTGAAATAGCCTGTGAAAACTATTAA

Upstream 100 bases:

>100_bases
ATTGTAATTAAAAATTAATTTTAAGCTATTAAATTGTTCATTAAATTATATGAACTGTTGATAATATAACATAATATACA
AATATATAGGAGGGTTTTTT

Downstream 100 bases:

>100_bases
TATATAAATCTTTAGTGATATAAGTCATTTTGAAGGCTCGGTTAGTAAATTTTTATTAAACTATAGATTTTATATTAAAT
ACAAAAAGCTATGAAACAGA

Product: rubrerythrin

Products: NA

Alternate protein names: RR [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKSLRGTKTAENLLKSFAGESQARGRYTYYASVARKEGFIQISNIFIETAEQEREHAKRFYKFLKEDLQGDAIEITASYP
VALYDNTADNLKAAASGENEEWTELYPSFAKVAREEGFQEVAVAYDMISKVEKEHEKRYLKLLENVENDKVFKKDEKVLW
KCSNCGFIYEGTAAPEKCPSCLHPKSYFEIACENY

Sequences:

>Translated_195_residues
MKSLRGTKTAENLLKSFAGESQARGRYTYYASVARKEGFIQISNIFIETAEQEREHAKRFYKFLKEDLQGDAIEITASYP
VALYDNTADNLKAAASGENEEWTELYPSFAKVAREEGFQEVAVAYDMISKVEKEHEKRYLKLLENVENDKVFKKDEKVLW
KCSNCGFIYEGTAAPEKCPSCLHPKSYFEIACENY
>Mature_195_residues
MKSLRGTKTAENLLKSFAGESQARGRYTYYASVARKEGFIQISNIFIETAEQEREHAKRFYKFLKEDLQGDAIEITASYP
VALYDNTADNLKAAASGENEEWTELYPSFAKVAREEGFQEVAVAYDMISKVEKEHEKRYLKLLENVENDKVFKKDEKVLW
KCSNCGFIYEGTAAPEKCPSCLHPKSYFEIACENY

Specific function: May provide oxidative stress protection via catalytic reduction of intracellular hydrogen peroxide [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 22380; Mature: 22380

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLRGTKTAENLLKSFAGESQARGRYTYYASVARKEGFIQISNIFIETAEQEREHAKRF
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
YKFLKEDLQGDAIEITASYPVALYDNTADNLKAAASGENEEWTELYPSFAKVAREEGFQE
HHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHH
VAVAYDMISKVEKEHEKRYLKLLENVENDKVFKKDEKVLWKCSNCGFIYEGTAAPEKCPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEEECCCCEEEECCCCHHHCCC
CLHPKSYFEIACENY
CCCCCHHHHEECCCC
>Mature Secondary Structure
MKSLRGTKTAENLLKSFAGESQARGRYTYYASVARKEGFIQISNIFIETAEQEREHAKRF
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
YKFLKEDLQGDAIEITASYPVALYDNTADNLKAAASGENEEWTELYPSFAKVAREEGFQE
HHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHH
VAVAYDMISKVEKEHEKRYLKLLENVENDKVFKKDEKVLWKCSNCGFIYEGTAAPEKCPS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHEEEECCCCEEEECCCCHHHCCC
CLHPKSYFEIACENY
CCCCCHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955396; 11792842 [H]