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The map label for this gene is 226948430

Identifier: 226948430

GI number: 226948430

Start: 1374257

End: 1375162

Strand: Direct

Name: 226948430

Synonym: CLM_1314

Alternate gene names: NA

Gene position: 1374257-1375162 (Clockwise)

Preceding gene: 226948429

Following gene: 226948431

Centisome position: 33.07

GC content: 30.79

Gene sequence:

>906_bases
ATGGATATTTTATTAGCAGTATTAGAGCAAGGATTTATATTTTCCATTGTCTGCTTTGGAGTATATATAACATATAAAAT
ATTAGATTTTCCAGACCTTTCTGTAGATGGAACCTTTCCTTTAGGAGCAGCTGTTGCAGCAGCTTTCCTAGTAAAAGGAT
ATAGTCCAGTCTTAAGTTCCTTAGCGGCTTTAGTAGCAGGGGCTATAGCAGGAGGAATAACAGGTATATTGCATGTTAAG
TTTAAAATAACTAATTTACTTTCAGGAATATTAGTTATGGTTGGGTTATATTCTATTAATTTGAGAATAATGGGGAAATC
AAATATACCTTTGTTTAATAAAATACATTTATTTTCGGATACTATGAATCCTATAATTATAATTACAGTGTTTCTTTTAA
TATGTAAAATTACTTTGGATTTATTTTTAAAAACAAAGGCAGGATTTATATTAAAAGCTACGGGAGATAATGAACAGTTA
GTACTCTCTCTTGGTGTAAATAAGGATTTAATAAAAATAATGGGACTAATGTTATCTAATGCGTTAGTAGCATTAGGGGG
AGCTTTAATGGCTCAATATCAAGGGTTTTCAGATGTAGGTATGGGCACAGGTATAGTAGTTATGGGGCTTGCATCTGTAA
TAATAGGAGAATCTTTATTTGGCAGAATAAAAGCTTTAAATGCCACTACAAGAGTATTATTAGGAGCTTTAGTATATAAG
TTAGCAGTATCAATAGCCTTAACTGTAGGTTTAGCTCCTACAGACTTAAAACTTGTAACAGCTATAACTGTAGTAATAGC
TTTAAGCTTAAATAAGAACCCTTTAAAAATAATAACAAAACAAAAAATTAAAGAGGGAGGGGTTTTAAATGCTTCAAATA
CAAAATCTGCACAAAGTGTTCAATAA

Upstream 100 bases:

>100_bases
CTAAATTATCAATAAATCCAGAAGTGGCTAAAAAATTAAATATAAAAATACCACAGGATATAGAAGATAAAGCTGAAAAA
ATCAAAGGAGGAAAAAAATA

Downstream 100 bases:

>100_bases
AGACACTGTAAATGAAAATAATTTATTTAATAATCTAAATTTAGATGTAAAAGCAGGAGACTTTATAACTATAATAGGGA
GCAATGGAGCAGGAAAATCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MDILLAVLEQGFIFSIVCFGVYITYKILDFPDLSVDGTFPLGAAVAAAFLVKGYSPVLSSLAALVAGAIAGGITGILHVK
FKITNLLSGILVMVGLYSINLRIMGKSNIPLFNKIHLFSDTMNPIIIITVFLLICKITLDLFLKTKAGFILKATGDNEQL
VLSLGVNKDLIKIMGLMLSNALVALGGALMAQYQGFSDVGMGTGIVVMGLASVIIGESLFGRIKALNATTRVLLGALVYK
LAVSIALTVGLAPTDLKLVTAITVVIALSLNKNPLKIITKQKIKEGGVLNASNTKSAQSVQ

Sequences:

>Translated_301_residues
MDILLAVLEQGFIFSIVCFGVYITYKILDFPDLSVDGTFPLGAAVAAAFLVKGYSPVLSSLAALVAGAIAGGITGILHVK
FKITNLLSGILVMVGLYSINLRIMGKSNIPLFNKIHLFSDTMNPIIIITVFLLICKITLDLFLKTKAGFILKATGDNEQL
VLSLGVNKDLIKIMGLMLSNALVALGGALMAQYQGFSDVGMGTGIVVMGLASVIIGESLFGRIKALNATTRVLLGALVYK
LAVSIALTVGLAPTDLKLVTAITVVIALSLNKNPLKIITKQKIKEGGVLNASNTKSAQSVQ
>Mature_301_residues
MDILLAVLEQGFIFSIVCFGVYITYKILDFPDLSVDGTFPLGAAVAAAFLVKGYSPVLSSLAALVAGAIAGGITGILHVK
FKITNLLSGILVMVGLYSINLRIMGKSNIPLFNKIHLFSDTMNPIIIITVFLLICKITLDLFLKTKAGFILKATGDNEQL
VLSLGVNKDLIKIMGLMLSNALVALGGALMAQYQGFSDVGMGTGIVVMGLASVIIGESLFGRIKALNATTRVLLGALVYK
LAVSIALTVGLAPTDLKLVTAITVVIALSLNKNPLKIITKQKIKEGGVLNASNTKSAQSVQ

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 31668; Mature: 31668

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLAVLEQGFIFSIVCFGVYITYKILDFPDLSVDGTFPLGAAVAAAFLVKGYSPVLSS
CHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
LAALVAGAIAGGITGILHVKFKITNLLSGILVMVGLYSINLRIMGKSNIPLFNKIHLFSD
HHHHHHHHHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHEEEEHHC
TMNPIIIITVFLLICKITLDLFLKTKAGFILKATGDNEQLVLSLGVNKDLIKIMGLMLSN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH
ALVALGGALMAQYQGFSDVGMGTGIVVMGLASVIIGESLFGRIKALNATTRVLLGALVYK
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVSIALTVGLAPTDLKLVTAITVVIALSLNKNPLKIITKQKIKEGGVLNASNTKSAQSV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q
C
>Mature Secondary Structure
MDILLAVLEQGFIFSIVCFGVYITYKILDFPDLSVDGTFPLGAAVAAAFLVKGYSPVLSS
CHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
LAALVAGAIAGGITGILHVKFKITNLLSGILVMVGLYSINLRIMGKSNIPLFNKIHLFSD
HHHHHHHHHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHEEEEHHC
TMNPIIIITVFLLICKITLDLFLKTKAGFILKATGDNEQLVLSLGVNKDLIKIMGLMLSN
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH
ALVALGGALMAQYQGFSDVGMGTGIVVMGLASVIIGESLFGRIKALNATTRVLLGALVYK
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVSIALTVGLAPTDLKLVTAITVVIALSLNKNPLKIITKQKIKEGGVLNASNTKSAQSV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]