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The map label for this gene is 226948429

Identifier: 226948429

GI number: 226948429

Start: 1373250

End: 1374257

Strand: Direct

Name: 226948429

Synonym: CLM_1313

Alternate gene names: NA

Gene position: 1373250-1374257 (Clockwise)

Preceding gene: 226948428

Following gene: 226948430

Centisome position: 33.05

GC content: 29.37

Gene sequence:

>1008_bases
ATGGTAGTAAAAAGAAAAATTTCAATTCTATTGGCACTGATATTTTCAGTTGCTATCTTTGGAGGTTGCTCAAAAATCTC
AACCACAAAAACATTAAAGGATAAAAGGGTTATAAATATAGGTATAGCTCAAATAATAGAGCATCCAGCTTTAGATTTAG
CAAAAAAAGGATTTGTAGATAGACTAGAAGAAAAAGGATTTAAAGATGGAGAAAATATAAAAATAGATTTTCAAAATGCC
CAAGGAGATATGGCTACAATTCAAACTATAACTCAAAATTTTGTAGCTCAAAGAAATGATATTATATATGCAATAGCAAC
TCCTTCAGTACAAGCGGCCTTTAATGCTACTAAAAAAATACCTATAGTTATGACAGCCATTACAGATCCTGTAGAATCAG
GAATTGTAAAATCTTTAGACAAATCAGGCACTAATGTGGCTGGGACTTCAGATAAAATATCCATAGAGGAAAATTTTAAG
TTAATAAAAGAGATATTACCTGGGAAAAAGACCATAGGGATATTATATAATACTAGTGAAAAAAATTCTGAGATACAGGT
TAGAGAAGCGGAAGAAAAGGCTAAAGAATTTGGATTTAAAATTATTAAAAAGGGTATAACCAATGTTAATGATATTCATC
AATCCTTAGCTTCTATATTAAATGAAATTGATATTATGTTTATTCCTACAGATAATACAGTGGCTTCTTCTATGCCATTT
ATAAGCAATGAATGCAATAAGAAAAATATACCAATAATAGGATCAGAAAAAGCCCATGTAGAAGGTGGAGCATTGGCTAC
ATCGGGTATAGATTACTACAAATTAGGAAAAGAATCTGCGGATGTGGCCATAGAAATTATAAATGGTAAAAATCCTAAAG
ATATGAAAGTGAAATTTATGAAAGAAACTAAATTATCAATAAATCCAGAAGTGGCTAAAAAATTAAATATAAAAATACCA
CAGGATATAGAAGATAAAGCTGAAAAAATCAAAGGAGGAAAAAAATAA

Upstream 100 bases:

>100_bases
GGTTTTTTTATTTATGCAAATAAAATCTTTACTGCTTATTGTTTTTCATTATATTTTGCAAAATAAAAATATATAAATTA
AAATTTTGGAGGATGGTAGT

Downstream 100 bases:

>100_bases
TGGATATTTTATTAGCAGTATTAGAGCAAGGATTTATATTTTCCATTGTCTGCTTTGGAGTATATATAACATATAAAATA
TTAGATTTTCCAGACCTTTC

Product: putative ABC transporter substrate-binding protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVVKRKISILLALIFSVAIFGGCSKISTTKTLKDKRVINIGIAQIIEHPALDLAKKGFVDRLEEKGFKDGENIKIDFQNA
QGDMATIQTITQNFVAQRNDIIYAIATPSVQAAFNATKKIPIVMTAITDPVESGIVKSLDKSGTNVAGTSDKISIEENFK
LIKEILPGKKTIGILYNTSEKNSEIQVREAEEKAKEFGFKIIKKGITNVNDIHQSLASILNEIDIMFIPTDNTVASSMPF
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIP
QDIEDKAEKIKGGKK

Sequences:

>Translated_335_residues
MVVKRKISILLALIFSVAIFGGCSKISTTKTLKDKRVINIGIAQIIEHPALDLAKKGFVDRLEEKGFKDGENIKIDFQNA
QGDMATIQTITQNFVAQRNDIIYAIATPSVQAAFNATKKIPIVMTAITDPVESGIVKSLDKSGTNVAGTSDKISIEENFK
LIKEILPGKKTIGILYNTSEKNSEIQVREAEEKAKEFGFKIIKKGITNVNDIHQSLASILNEIDIMFIPTDNTVASSMPF
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIP
QDIEDKAEKIKGGKK
>Mature_335_residues
MVVKRKISILLALIFSVAIFGGCSKISTTKTLKDKRVINIGIAQIIEHPALDLAKKGFVDRLEEKGFKDGENIKIDFQNA
QGDMATIQTITQNFVAQRNDIIYAIATPSVQAAFNATKKIPIVMTAITDPVESGIVKSLDKSGTNVAGTSDKISIEENFK
LIKEILPGKKTIGILYNTSEKNSEIQVREAEEKAKEFGFKIIKKGITNVNDIHQSLASILNEIDIMFIPTDNTVASSMPF
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIP
QDIEDKAEKIKGGKK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36691; Mature: 36691

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKRKISILLALIFSVAIFGGCSKISTTKTLKDKRVINIGIAQIIEHPALDLAKKGFVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHH
RLEEKGFKDGENIKIDFQNAQGDMATIQTITQNFVAQRNDIIYAIATPSVQAAFNATKKI
HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCC
PIVMTAITDPVESGIVKSLDKSGTNVAGTSDKISIEENFKLIKEILPGKKTIGILYNTSE
CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEEEECCC
KNSEIQVREAEEKAKEFGFKIIKKGITNVNDIHQSLASILNEIDIMFIPTDNTVASSMPF
CCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCC
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFM
CCCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEE
KETKLSINPEVAKKLNIKIPQDIEDKAEKIKGGKK
ECCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MVVKRKISILLALIFSVAIFGGCSKISTTKTLKDKRVINIGIAQIIEHPALDLAKKGFVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHH
RLEEKGFKDGENIKIDFQNAQGDMATIQTITQNFVAQRNDIIYAIATPSVQAAFNATKKI
HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCC
PIVMTAITDPVESGIVKSLDKSGTNVAGTSDKISIEENFKLIKEILPGKKTIGILYNTSE
CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEEEEEEECCC
KNSEIQVREAEEKAKEFGFKIIKKGITNVNDIHQSLASILNEIDIMFIPTDNTVASSMPF
CCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCC
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFM
CCCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEE
KETKLSINPEVAKKLNIKIPQDIEDKAEKIKGGKK
ECCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA