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The map label for this gene is 226948396

Identifier: 226948396

GI number: 226948396

Start: 1333381

End: 1334160

Strand: Direct

Name: 226948396

Synonym: CLM_1280

Alternate gene names: NA

Gene position: 1333381-1334160 (Clockwise)

Preceding gene: 226948394

Following gene: 226948397

Centisome position: 32.09

GC content: 22.44

Gene sequence:

>780_bases
ATGGAAAAAGATTTTGCAATAGCTTTTATAGGAAATAATGTTTTTTATCATTTAGGGGTAATTAAAGCTGTAGAAGAGTA
TAATATTTATAATAAATTTAAGGCAGTATCAGGAACTGGGTTAGGATCATTAAGTGCTATAATGTTTGGGAAAAAAGATT
ATAATTCATTTAAAAATCTATGTACTTTAATGAGTGACATAAAAAGAATACATATAAAAGAAGATGAGGTTTATGAAATT
TTAAATATGCATACTATAAATAAGAGTTTAGATGAAAAAATATGCATGTGGAGCAGAAAGATTTCTAAAGAAGGCATGAT
AAATTGGAGTGATATGTTAAAAATTATAAATAATAAATATATAAGTGTAGGAAAGAATAATTTTAAAATGGATTGTTATT
TAGGGTGCTATGAGTTGCCTTTTATGAGAAAATCAGTATTTAAATTAAACAATTGTGATAGTAATTATATAGAGAAAGTT
ATATTAAATTCAGTAGCAAAGCCTAGTATATTTAATAATAGAGTTAAGAGTAAATCTTTTATTACAGGAGATATAAATTG
TGAATTGCCCATAGAAATATTAAAAGATAATAATTATAAAAACATAATAATAATTGATTCAGATAATATGAAGATAGAAT
ATAGATATGAAGGGGTAGAAAAATTTAATAGGAAAAATTTAGAGAATAAGATTAAATATGATGAATCGGAAAAATATATA
CAAAAAGCATATGAGGACACAATAAATATTATAAAAAACAATTTAAAAAATATAGCTTAA

Upstream 100 bases:

>100_bases
TTTTTATTTTTATATTTCAAGATTTGTGGTAATATATATTTATGGATTATTTATTTAAAGGTTTACAACAGAGGATAGTA
TAAATTTAGAGGTGAATTAT

Downstream 100 bases:

>100_bases
ATAAAAATTTTATTAAGTTTAAGAAAAGTTGCTAATGATTATTAAAGTATCTTTAGCAACTTTTTTATTTATACATATTG
TTAACCAAACTATAAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEKDFAIAFIGNNVFYHLGVIKAVEEYNIYNKFKAVSGTGLGSLSAIMFGKKDYNSFKNLCTLMSDIKRIHIKEDEVYEI
LNMHTINKSLDEKICMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNCDSNYIEKV
ILNSVAKPSIFNNRVKSKSFITGDINCELPIEILKDNNYKNIIIIDSDNMKIEYRYEGVEKFNRKNLENKIKYDESEKYI
QKAYEDTINIIKNNLKNIA

Sequences:

>Translated_259_residues
MEKDFAIAFIGNNVFYHLGVIKAVEEYNIYNKFKAVSGTGLGSLSAIMFGKKDYNSFKNLCTLMSDIKRIHIKEDEVYEI
LNMHTINKSLDEKICMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNCDSNYIEKV
ILNSVAKPSIFNNRVKSKSFITGDINCELPIEILKDNNYKNIIIIDSDNMKIEYRYEGVEKFNRKNLENKIKYDESEKYI
QKAYEDTINIIKNNLKNIA
>Mature_259_residues
MEKDFAIAFIGNNVFYHLGVIKAVEEYNIYNKFKAVSGTGLGSLSAIMFGKKDYNSFKNLCTLMSDIKRIHIKEDEVYEI
LNMHTINKSLDEKICMWSRKISKEGMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNCDSNYIEKV
ILNSVAKPSIFNNRVKSKSFITGDINCELPIEILKDNNYKNIIIIDSDNMKIEYRYEGVEKFNRKNLENKIKYDESEKYI
QKAYEDTINIIKNNLKNIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30280; Mature: 30280

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDFAIAFIGNNVFYHLGVIKAVEEYNIYNKFKAVSGTGLGSLSAIMFGKKDYNSFKNL
CCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
CTLMSDIKRIHIKEDEVYEILNMHTINKSLDEKICMWSRKISKEGMINWSDMLKIINNKY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
ISVGKNNFKMDCYLGCYELPFMRKSVFKLNNCDSNYIEKVILNSVAKPSIFNNRVKSKSF
EEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCE
ITGDINCELPIEILKDNNYKNIIIIDSDNMKIEYRYEGVEKFNRKNLENKIKYDESEKYI
EEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEECCHHHHHHCCCHHHCCCCHHHHHH
QKAYEDTINIIKNNLKNIA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKDFAIAFIGNNVFYHLGVIKAVEEYNIYNKFKAVSGTGLGSLSAIMFGKKDYNSFKNL
CCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH
CTLMSDIKRIHIKEDEVYEILNMHTINKSLDEKICMWSRKISKEGMINWSDMLKIINNKY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
ISVGKNNFKMDCYLGCYELPFMRKSVFKLNNCDSNYIEKVILNSVAKPSIFNNRVKSKSF
EEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCE
ITGDINCELPIEILKDNNYKNIIIIDSDNMKIEYRYEGVEKFNRKNLENKIKYDESEKYI
EEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEECCHHHHHHCCCHHHCCCCHHHHHH
QKAYEDTINIIKNNLKNIA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA