Click here to switch to the map view.

The map label for this gene is 226947890

Identifier: 226947890

GI number: 226947890

Start: 800095

End: 800406

Strand: Reverse

Name: 226947890

Synonym: CLM_0746

Alternate gene names: NA

Gene position: 800406-800095 (Counterclockwise)

Preceding gene: 226947891

Following gene: 226947888

Centisome position: 19.26

GC content: 41.99

Gene sequence:

>312_bases
TTGTATTTTGAATATGGCCGCGAAGAAACTGAATTTTTAAAAAGCCGCGATGAATTGCTGGGGGCGGCAATTGACCGAAT
TGAGCATATATACCGGGCAGTCGATAACGATCTTTTTTCTTCTGTCGTTCATCATATCATCGGACAACGAATCTCCACTC
GGGCGCAAGCGACAATCTGGAAAAGACTAGAGGATAGGTTGGAAATTGTCGATGCTAATGCTATCTGCTCTCTTGAATTA
GAAGAACTTCAAAAACTGGGTATGACATTTAGGAAGGCAGAAAACAATCTCCGTGAATGTTTTCTGCCATGA

Upstream 100 bases:

>100_bases
TTTAAAACAGAAGCTTGCTGTACCTCGAATTGAATATCCAAAATTGAGAAGAAAGTTATCAAATGCCTATGCTAAAATTG
TAATGGATAGAGGTGATGTT

Downstream 100 bases:

>100_bases
ATATTCTAACTGCTTTTCTCTCCAAAATTAGCTAATGCCTTACCATTTCCCGGGGTACGCTCCTTTGTATTTTTGCGCGA
CAGAAAATACATCGAACACA

Product: hypothetical protein

Products: DNA; protein S-methyl-L-cysteine

Alternate protein names: Methylated-DNA-Protein-Cysteine Methyltransferase; DNA-3-Methyladenine Glycosylase II; Base Excision DNA Repair Protein; Base Excision DNA Repair Protein HhH-GPD Family

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MYFEYGREETEFLKSRDELLGAAIDRIEHIYRAVDNDLFSSVVHHIIGQRISTRAQATIWKRLEDRLEIVDANAICSLEL
EELQKLGMTFRKAENNLRECFLP

Sequences:

>Translated_103_residues
MYFEYGREETEFLKSRDELLGAAIDRIEHIYRAVDNDLFSSVVHHIIGQRISTRAQATIWKRLEDRLEIVDANAICSLEL
EELQKLGMTFRKAENNLRECFLP
>Mature_103_residues
MYFEYGREETEFLKSRDELLGAAIDRIEHIYRAVDNDLFSSVVHHIIGQRISTRAQATIWKRLEDRLEIVDANAICSLEL
EELQKLGMTFRKAENNLRECFLP

Specific function: Unknown

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.63; 3.2.2.21

Molecular weight: Translated: 12101; Mature: 12101

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFEYGREETEFLKSRDELLGAAIDRIEHIYRAVDNDLFSSVVHHIIGQRISTRAQATIW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLEDRLEIVDANAICSLELEELQKLGMTFRKAENNLRECFLP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYFEYGREETEFLKSRDELLGAAIDRIEHIYRAVDNDLFSSVVHHIIGQRISTRAQATIW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLEDRLEIVDANAICSLELEELQKLGMTFRKAENNLRECFLP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA containing 6-O-methylguanine; protein L-cysteine

Specific reaction: DNA (containing 6-O-methylguanine) + protein L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA