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The map label for this gene is ygiQ [C]

Identifier: 226947423

GI number: 226947423

Start: 233620

End: 235557

Strand: Reverse

Name: ygiQ [C]

Synonym: CLM_0251

Alternate gene names: 226947423

Gene position: 235557-233620 (Counterclockwise)

Preceding gene: 226947432

Following gene: 226947419

Centisome position: 5.67

GC content: 29.77

Gene sequence:

>1938_bases
TTGAGTAATATGGACTTTTTACCCATAAGTAAAGAGGATTTGAAAAAAAGAAATATAGATGTTTTAGATTTTATAATAGT
AACTGGTGATGCTTATGTAGATCATCCATCCTTCGGTACTGCAATTATAGGCAGAGTATTAGAAAGAGAAGGATTTACTG
TGGGAATTATAGCTCAACCTAATTGGAATAACATAGAAGACTTTAAAAAACTAGGCAAACCTAAATATGGATTTTTAGTC
AACTCTGGTAATATAGACTCTATGGTAAATCACTATACTGCATCTAAAAAAAAGAGGCATGATGATTTTTATTCCCCAGG
TGGCAAATCTGGATATAGACCTGATAGAGCTGTTATTGTTTACTGTAATAAAATAAAGGAAGCTTTCAAAGATTCGCCCA
TAATAATAGGTGGTATAGAAGCTAGTTTAAGAAGGTTTGCTCATTATGATTACTGGGATAACTCAGTAAGAAGAAGTATT
CTAGAAGATTCTAGCGCAGATTTATTAATATATGGTATGGGGGAAAAACCTATAGTTCAAGTTTCTAACCTTTTAAGATA
TGGGATGAAAATAGACAGCATAAAAAATGTAAGAGGTACAACATATATAGAAAAAGATATATCCTCTTTGAAGGATTATA
TTGAGATACCATCCTTTGAAGAAGTTTCTACAAATAAGAAATCCTATGCAGAAGCTTACAAAATACAATATTATGAACAA
GACTCCATAAGGGGTAAAACCTTAGTACAAAAACATAAAGAAAGGTATGTAGTACAAAATCCTCCACAACCACCTCTGTC
TCAAGAAGAAATGGATGAAGTTTATGCACTTCCATATGCTAGAACCTATCATCCTATGTATGAGGCTGAAGGCGGAATTC
CTGCTATTAAAGAGGTTAAATTTTCAATAACTAGCCATAGAGGCTGCTATGGAAGTTGCTCTTTTTGTGCTTTAACCTTT
CATCAAGGAAGGGTTATTCAAAATAGAAGCCAAGACTCTATTTTAAAAGAAGCAAATATGATGACTAATATGAAGGATTT
CAAAGGCTACATACATGATGTAGGTGGTCCTACAGCTAACTTTAGACATAGGGCTTGTAAAGTTCAAGAAAAACATGGAA
CTTGCAAAAACAAGCAATGTGTATTCCCAAAAGCCTGCAAAAATTTAATTGTAGATCATAAAGAATACTTAAGTTTATTA
AGAAAAATAAGAAAAATACCTAATGTAAAAAAAGTCTTTATACGTTCTGGTATTAGATTTGATTATTTGATGTATGATAA
AAATGATGAATTTTTTAAAGAATTATGTGAACATCATATAAGTGGACAGTTAAAAGTTGCCCCTGAACATATAAGTGATA
AAGTTTTAAACTTAATGGGTAAACCTACTAGAAATGTTTATGATTCTTTTGTAAAAAAATATTATGATATAAATAAGAAA
ATACATAAAAATCAATTTTTAGTTCCTTATTTAATGTCTAGTCATCCTGGTAGCGATTTAAAGGCTGCCATAGAACTAGC
TCAATATATAAAAAAAATGGGCTATACTCCAGAGCAAGTACAAGATTTTTATCCTACTCCTGGTAGTTTATCAACTACTA
TGTATTATACGGGAATAAATCCTTTAACCGAGGAAAAAGTTTATATACCTAAAGATCAAAAAGAAAAAAGAATGCAAAGG
GCATTATTACAGTTCTCTATTCATGATAACTATGATCTCGTAAAAGAAGCTTTGATAAAAGCTCATAGAGAAGACTTAAT
AGGAAATGGGCCTGATTGCTTAATACCTTACAATAAACCTTATAAAAAATCTCATAAAAAAAATAATGCTAAGAATAATA
ATAACCATTATAATAAAAATAATAATTATAATAAGAATAAGGATATTAGTAAAAAAAATAAAAAAAACTCTCTTTCTAAG
CACAAAAAAAGAAAATAA

Upstream 100 bases:

>100_bases
TACCGTATTTCTTATTTTTAAATTATTTTTGATATTAAACAAAATGAACTGTATAATAATATTATTACAAAATTGTATTT
AAGATAGGAGAATGAAAATA

Downstream 100 bases:

>100_bases
ACAGCCTCTAGTGCTGTTTATTTTTTATATATTATTAAATAAAAATCATCGTAAATTCTATATTTGATTAAATAGTCAAA
TAAACTTAGTTTTATCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MSNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLV
NSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSI
LEDSSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQ
DSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTF
HQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLL
RKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKK
IHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQR
ALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSK
HKKRK

Sequences:

>Translated_645_residues
MSNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLV
NSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSI
LEDSSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQ
DSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTF
HQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLL
RKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKK
IHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQR
ALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSK
HKKRK
>Mature_644_residues
SNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLVN
SGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSIL
EDSSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQD
SIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTFH
QGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLR
KIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKKI
HKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRA
LLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSKH
KKRK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=698, Percent_Identity=40.5444126074499, Blast_Score=545, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 74556; Mature: 74425

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQP
CCCCCCCCCCHHHHHHCCCCEEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEEEEECC
NWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIV
CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
YCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILEDSSADLLIYGMGEKPIVQ
EEHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
VSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQ
HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHEEEECC
DSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVK
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHCCCCCCHHHHHE
FSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTAN
EEHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
FRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRF
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCE
DYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKK
EEEEECCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGIN
HHCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCC
PLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKP
CCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
YKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSKHKKRK
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQP
CCCCCCCCCHHHHHHCCCCEEEEEEEECCCEECCCCHHHHHHHHHHHHCCCEEEEEECC
NWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIV
CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
YCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILEDSSADLLIYGMGEKPIVQ
EEHHHHHHHCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
VSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQ
HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHEEEECC
DSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVK
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHCCCCCCHHHHHE
FSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTAN
EEHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
FRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRF
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCE
DYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKK
EEEEECCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGIN
HHCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCC
PLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKP
CCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
YKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSKHKKRK
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA