Click here to switch to the map view.

The map label for this gene is pssA [H]

Identifier: 226947419

GI number: 226947419

Start: 230464

End: 230985

Strand: Reverse

Name: pssA [H]

Synonym: CLM_0247

Alternate gene names: 226947419

Gene position: 230985-230464 (Counterclockwise)

Preceding gene: 226947423

Following gene: 226947416

Centisome position: 5.56

GC content: 29.31

Gene sequence:

>522_bases
ATGGCAAAGATAGCAAAGAGTGCCGTACCAAATGCTTTTACTTTAGGAAATTTAGGTTGTGGAGTTATGTCTTTAATGAT
GACATTTCAACAAAACTATAAATGGGCTGCTTTATTTATACTAATTGCAGGTTTAATGGATAGATATGATGGGAGAGTTG
CTAGGCTTTTAAAGGTTGATAGTGCTATTGGTAAGGAATTAGATTCTTTAGCTGATTTAGTTTCTTTTGGTGTAGCACCT
TCTATTTTAACCTTTCACATTTATAACTTTAGTTATTTGGGAATACTTGGTTATTTATTAGTACTAATGTTCCCTATAGC
TGGAGCTTATAGACTTGCTAGATATAATATTACTGAATTTGATGGTTCTTTTTCTGGTATACCTATAACTTTAGCTGGTA
TGTTTATGGCTATATATTGTTTAATTAGCTCAAATAAAATTGGAACTTCAGGCCTAACTATAATTTTAATGATTACATTA
TCTTATCTTATGGTTAGTAATGTAAAATTAAAAAAATTTTAA

Upstream 100 bases:

>100_bases
TTTTTAATGGTATTTATAGCTTATATATATTTGCAAAATGTTGTATAATATTATATATTTCAAGTAATAGGAATTATATT
TTTTTAGGAGTGATAATATA

Downstream 100 bases:

>100_bases
AAAATCGTGGTTTTCCACGATTTTTTTTATTATTATTAACTTAAATACATTAAAATTTATGTTTTTAATATTAAATCCCT
TTTATGCTTTTTAAATATTC

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAP
SILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITL
SYLMVSNVKLKKF

Sequences:

>Translated_173_residues
MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAP
SILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITL
SYLMVSNVKLKKF
>Mature_172_residues
AKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAPS
ILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLS
YLMVSNVKLKKF

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=132, Percent_Identity=38.6363636363636, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 18940; Mature: 18809

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVD
CCCCHHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
SAIGKELDSLADLVSFGVAPSILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
DGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLSYLMVSNVKLKKF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVD
CCCHHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
SAIGKELDSLADLVSFGVAPSILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC
DGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLSYLMVSNVKLKKF
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002567; 9384377 [H]