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The map label for this gene is rpoB

Identifier: 226942770

GI number:

Start: 593880

End: 597956

Strand: Direct

Name: rpoB

Synonym: Avin_06170

Alternate gene names: NA

Gene position: NA

Preceding gene: 226942769

Following gene: 226942771

Centisome position: NA

GC content: NA

Gene sequence:

>4077_bases
ATGGCTTACTCATACACTGAGAAAAAACGTATCCGCAAGGACTTTAGCAAGTTGCCGGACGTCATGGATGTGCCTTATCT
CCTGGCTATCCAGTTGGATTCCTATCGCGAATTCCTGCAGGCCGGTGTGAGCAAGGACAAGCTCCGCGACGTTGGCTTGC
ATGCAGCCTTCAAGTCCGTTTTCCCGATCATCAGCTATTCCGGCAATGCTGCCCTGGAATACGTTGGCTACCGTCTGGGC
GAGCCGGCCTTCGACGTCAAGGAGTGCGTGCTGCGTGGTGTGACCTTCGCCGTACCGCTTCGCGTGAAGGTTCGCCTGAT
CATTTTCGACAAGGAGTCCTCGAACAAGGCGATCAAGGACATCAAGGAGCAGGAGGTCTACATGGGGGAAATCCCCCTGA
TGACCGAGAACGGCACCTTCATCGTCAACGGTACCGAGCGCGTGATCGTTTCCCAGCTGCACCGCTCCCCGGGTGTGTTC
TTCGACCACGACCGCGGCAAGACCCACAGCTCCGGCAAACTGCTGTATTCCGCACGGATCATTCCCTACCGTGGCTCCTG
GCTCGACTTCGAGTTCGATCCGAAGGATGCCGTGTTCGTCCGTATCGACCGCCGCCGCAAACTGCCGGCTTCGGTGCTAC
TGCGGGCACTGGGCTACTCCACCGAGGAAGTGCTGGACATTTTCTATGACACCAACGTATTCCACGTGACGGAGCAGGGG
CTCAGCCTGGAACTGGTGCCCCAGCGCCTGCGTGGCGAGATCGCTGTCTTCGACATCAAGGATGCCTCCGGCAAGGTCAT
CGTCGAACAGGGACGGCGCATCACCGCCCGTCATATCAACCAACTGGAAAAGGCCGGCATCAAGGAGCTGGACGTTCCGC
TGGAATACGTCCTCGGGCGGACTTCGGCCAAGGTCATCGTGCACCCCTCCACCGGCGAAATCATCGCCGAGTGCAACAGC
GAACTGACCCAGGACCTGTTGGTGAAGATCGCCAAGGCTCAGGTGGTGCGCATCGAAACCCTCTACACCAACGACATCGA
CTGCGGTCCGTTCATTTCCGACACGCTGAAGATCGACTCGACCACCAATCAACTGGAAGCCTTGGTCGAGATCTATCGCA
TGATGCGTCCGGGCGAGCCGCCGACCAAGGATGCCGCCGAGACCCTGTTCAACAACCTGTTCTTCAGTGCCGAGCGTTAC
GACCTGTCTGCTGTCGGCCGCATGAAGTTCAACCGCCGTATCGGTCGCGAGGAGATCGAGGGGGCTGGGGTGCTGAGCCG
CGAGGATATCGTCGACGTGCTCAAGACCCTGGTGGACATCCGCAACGGCAAGGGTATCGTCGATGACATCGACCACCTGG
GTAACCGTCGTGTGCGCTGCGTCGGCGAAATGGCCGAGAACCAGTTCCGCGTCGGCCTGGTCCGCGTCGAGCGCGCTGTC
AAGGAGCGCCTGTCGATGGCGGAGAGCGAGGGCCTGATGCCCCAGGACCTGATCAATGCCAAGCCGGTGGCTGCCGCGGT
CAAGGAGTTTTTCGGCTCCAGCCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTCTCCGAGATCACCCACAAGCGTC
GTGTTTCCGCGCTCGGTCCGGGTGGTCTGACTCGCGAACGCGCGGGCTTCGAGGTGCGCGACGTACACCCGACCCACTAC
GGCCGCGTGTGTCCGATCGAAACCCCTGAAGGTCCGAACATCGGCCTGATCAACTCGCTGGCCGCCTATGCCCGTACCAA
CCAGTACGGCTTCCTGGAAAGCCCGTACCGGGTGGTCAAGGAAGGGCAGGTGACCGACGAGATCGTGTTCCTTTCCGCCA
TCGAGGAAGCCGATCACGTGATCGCCCAGGCTTCGGCGACGCTGGACGAGAACGGGCGGCTGATCGACGAACTGGTGGCT
GTCCGGCACCTGAACGAATTCACCGTCAAGGCACCCGAAGACGTCACCTTGATGGATGTGTCGCCGCGCCAGGTGGTATC
CGTCGCCGCCTCGCTGATTCCCTTCCTCGAACACGACGACGCCAACCGCGCGCTCATGGGTTCCAACATGCAGCGTCAGG
CCGTGCCGACCCTGCGCGCCGACAAGCCGCTGGTCGGTACCGGCATGGAGCGCAACGTGGCGCGCGACTCGGGCGTCTGC
GTGGTGGCTCGGCGTGGCGGGGTGATCGATTCGGTCGATGCCAGCCGCATCGTGGTGCGGGTCAACAACGACGAGGTCGA
GACCGGCGAAGCCGGCGTGGACATCTACAACCTGACCAAGTACACCCGTTCCAACCAGAACACTTGCATCAACCAGCGTC
CGCTGGTCAGCAAGGGCGATCAGGTGGCGCGCGGCGACATCATGGCCGACGGCCCGTCCACCGACATGGGCGAACTGGCC
CTCGGGCAGAACATGCGCGTGGCCTTCATGCCTTGGAACGGCTTCAACTTCGAGGACTCCATCTGCCTGTCCGAGCGGGT
GGTGCAGGAAGACCGCTTCACCACCATCCATATCCAGGAACTGACCTGCGTGGCCCGCGACACCAAGCTCGGCCCGGAGG
AAATCACCGCGGATATCCCGAACGTCGGCGAGGCCGCGCTGAACAAGCTGGACGAGGCGGGTATCGTCTATGTCGGTGCC
GAGGTCATGGCGGGCGACATCCTGGTCGGCAAGGTCACGCCGAAGGGCGAGACTCAGCTGACCCCGGAAGAGAAGCTGCT
GCGTGCGATCTTCGGCGAGAAGGCCAGCGACGTGAAGGACACCTCCCTGCGCGTACCCACCGGTACCAAGGGCACCGTCA
TCGACGTCCAGGTGTTCACCCGCGATGGCGTCGAGCGCGATTCGCGTGCCTTGGCCATCGAGAGGATGCAACTGGACGAA
ATCCGCAAGGACCTCAACGAGGAGTTCCGTATCGTCGAGGGGGCGACCTTCGAGCGTCTGCGGGCCGCTCTGGTCGGTGC
CGTATGCGAGGGCGGGGCGGGCCTGAAGAAGGGCACCGAGATCGACGACGGAATCCTCGACGGACTCGAGCGTGGCCAGT
GGTTCAAGCTGCGCATGGCCGACGACGCGCTCAACGAGCAGTTGGAAAAGGCCCAGGCCTATCTGGCCGACCGCCGGCAA
CTGCTCGACGACAAGTTCGAGGACAAGAAGCGCAAGCTGCAGCAGGGCGACGACCTGGCACCGGGCGTGCTGAAGATCGT
CAAGGTCTATCTGGCCATCAAGCGCCGTATCCAGCCTGGCGACAAAATGGCCGGCCGCCACGGCAACAAGGGTGTGGTAT
CGGTGATCATGCCGGTCGAGGACATGCCCTACGATGCCAACGGCACCCCCGTGGACATCGTTCTCAACCCGCTGGGCGTG
CCGTCGCGGATGAACGTCGGACAGATCCTCGAGACCCACCTGGGGCTGGCCGCCAAGGGGCTGGGTGAGAAGATCAACCG
GATGCTCGAGGAGCAGCGCAAGGTTGCCGAACTGCGCCAGTTCCTCGGCGAGGTGTACAACGAGATCGGCGGGCGCCAGA
AGGAGGATCTGGACTCTCTGAGCGATTCCGAGATTCTCGACCTGGCGAGCAACCTGCGCGGCGGCGTGCCGATGGCCACG
CCGGTGTTCGACGGTGCCAGGGAAACCGAAATCAAGGCCATGCTGAAACTGGCCGACCTGCCGGAAAGCGGTCAGATGCG
CCTGTTCGACGGCCGGACCGGCAACCAGTTCGAGCGCCCGACCACCGTCGGCTACATGTACATGCTCAAGCTGAACCACC
TGGTCGACGACAAGATGCACGCGCGTTCCACCGGTTCCTACAGCCTGGTTACCCAGCAGCCGCTGGGCGGCAAGGCGCAG
TTCGGCGGTCAGCGTTTCGGGGAGATGGAGGTCTGGGCGCTGGAAGCCTACGGTGCCGCCTACACCCTGCAGGAAATGCT
CACCGTGAAATCGGACGACGTGAACGGGCGGACCAAGATGTACAAGAACATCGTGGATGGCGATCACCGGATGGAGGCCG
GCATGCCCGAGTCCTTCAACGTGCTGATCAAGGAAATCCGCTCGCTCGGCATCGACATCGAACTGGAAACCGAATAA

Upstream 100 bases:

>100_bases
CTACCACCTCAGAGGTGGCGCAGGCAATCGGCCTGCACGATTTCTGGCAGCTCCCCTTCGGAGAGGCCAAACAAGCAGGT
GACCAAGCTGGGGAACGCTG

Downstream 100 bases:

>100_bases
CCACGCACCGCTCGCGCGGTGCCCGGCGCGGGCCGGACACCGCCGGTTCGTGAGGAGGAAAGGCTTTGAAAGACCTGCTG
AATCTCTTGAAAAACCAGGG

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1358_residues
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGVSKDKLRDVGLHAAFKSVFPIISYSGNAALEYVGYRLG
EPAFDVKECVLRGVTFAVPLRVKVRLIIFDKESSNKAIKDIKEQEVYMGEIPLMTENGTFIVNGTERVIVSQLHRSPGVF
FDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDAVFVRIDRRRKLPASVLLRALGYSTEEVLDIFYDTNVFHVTEQG
LSLELVPQRLRGEIAVFDIKDASGKVIVEQGRRITARHINQLEKAGIKELDVPLEYVLGRTSAKVIVHPSTGEIIAECNS
ELTQDLLVKIAKAQVVRIETLYTNDIDCGPFISDTLKIDSTTNQLEALVEIYRMMRPGEPPTKDAAETLFNNLFFSAERY
DLSAVGRMKFNRRIGREEIEGAGVLSREDIVDVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHY
GRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVKEGQVTDEIVFLSAIEEADHVIAQASATLDENGRLIDELVA
VRHLNEFTVKAPEDVTLMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVC
VVARRGGVIDSVDASRIVVRVNNDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKGDQVARGDIMADGPSTDMGELA
LGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGA
EVMAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDSRALAIERMQLDE
IRKDLNEEFRIVEGATFERLRAALVGAVCEGGAGLKKGTEIDDGILDGLERGQWFKLRMADDALNEQLEKAQAYLADRRQ
LLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQPGDKMAGRHGNKGVVSVIMPVEDMPYDANGTPVDIVLNPLGV
PSRMNVGQILETHLGLAAKGLGEKINRMLEEQRKVAELRQFLGEVYNEIGGRQKEDLDSLSDSEILDLASNLRGGVPMAT
PVFDGARETEIKAMLKLADLPESGQMRLFDGRTGNQFERPTTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQ
FGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELETE

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA