Click here to switch to the map view.

The map label for this gene is salA [H]

Identifier: 226225136

GI number: 226225136

Start: 2645017

End: 2646045

Strand: Reverse

Name: salA [H]

Synonym: Lm4b_02557

Alternate gene names: 226225136

Gene position: 2646045-2645017 (Counterclockwise)

Preceding gene: 226225138

Following gene: 226225135

Centisome position: 90.85

GC content: 38.97

Gene sequence:

>1029_bases
ATGTTAAACGAACAACAAATTACTAGATTGCTATATAGATTGCAAGATCCTGTTTTAGAGGCAAGCTTAGAAGAAACAGA
AGGTGTTTTAGAAGTGCAAGTGCTTGAAGAAACAGCAAACATCAAAATCGCATTAGCTGATCCAGCAGTAGAAACGGATC
ATTTTGTTCATAATATAGAAGAACTTCTCACCCAATTCGGCGTAAATGAAATAAATATTGAGCTAGAATACCTACCCGCA
GCAGTTATTGACCGCATTTTCCAAGCAAGAGATAACATACTCTCAGAAGCTAGTGAAACGAAATTCTTAGCAATAGCGAG
TGGTAAAGGTGGCGTCGGGAAATCAACTGTCTCTGCGAATCTTGCAATCGCCTTAGCACAACAAGGCAAAAAAGTAGGAT
TATTAGACGCGGATATATATGGATTCAGTATTCCTGTACTGCTAGGAACAACCGAATCCCCCCGCAAAGAAAATGGTCAA
ATCATCCCAGTCGAAACACACGGCATTCAAATGATTTCTATGGATTTTTTTGTGGAACAAGGAGAACCAGTTATCTGGCG
CGGACCAATGCTAGGGAAAATGATTAAAATGTTTTTAGAAGAAGTAAGATGGGGAAAACCAGACTATTTACTTATCGATT
TACCACCTGGAACTGGAGATGTTGCGCTAGATATCCATACGCTTATCCCGAAATGCAATGAACTTATTGTTACAACACCA
CATTATGCAGCCGCGTCAGTCGCATCTCGAGCAGGATATATGGCAGCAAAAAACAATCACAAAATCATCGGTGTAATCGA
AAATATGTCTTATCTTACTTTAGCTGATGGACAAGTATTAAAAGTATTCGGACAAGGCGGCGGCGAAAAAGTTGCTGCAG
ACTTAGAAACACAACTTTTAATTCAACTGCCAATAGAACAACCAGAACCAAATGGAAATGGCTATGTATCAGCCCTTTTC
AACTCTTCAAGCACTTCAGGAAAAGCATATAAAACCCTAGCAGAGAAAATAATTCCATATTTATCATAA

Upstream 100 bases:

>100_bases
AAACTTTTGTACCGAAAAGACAAGCAATATGTGAAATAATAAAACGGTCATGCTATAATAATCAGTATGTCAGCGCATTC
ATTTTTGGAGGTTTTTATAT

Downstream 100 bases:

>100_bases
AAACTTTGTAAAAAGTATTGACGAAAGGCAAAAATCTTGGTATATTTATAAACGTTGCTGATGCGGACAAAACGCTTTCG
CAACAAAAGAAACTGACCTT

Product: ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPA
AVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQ
IIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKPDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTP
HYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALF
NSSSTSGKAYKTLAEKIIPYLS

Sequences:

>Translated_342_residues
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPA
AVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQ
IIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKPDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTP
HYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALF
NSSSTSGKAYKTLAEKIIPYLS
>Mature_342_residues
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPA
AVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQ
IIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKPDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTP
HYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALF
NSSSTSGKAYKTLAEKIIPYLS

Specific function: Negatively regulates the expression of hpr/scoC. The effect on hpr/scoC may be indirect [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]

Homologues:

Organism=Homo sapiens, GI157384956, Length=247, Percent_Identity=36.0323886639676, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI6912540, Length=211, Percent_Identity=38.3886255924171, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI118572611, Length=212, Percent_Identity=36.7924528301887, Blast_Score=113, Evalue=3e-25,
Organism=Escherichia coli, GI87082045, Length=336, Percent_Identity=34.2261904761905, Blast_Score=162, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI25143050, Length=251, Percent_Identity=37.4501992031873, Blast_Score=125, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6322188, Length=216, Percent_Identity=37.962962962963, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6321347, Length=243, Percent_Identity=34.9794238683128, Blast_Score=109, Evalue=7e-25,
Organism=Drosophila melanogaster, GI221511043, Length=171, Percent_Identity=43.859649122807, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24667611, Length=214, Percent_Identity=38.3177570093458, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19921440, Length=219, Percent_Identity=36.0730593607306, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019591
- InterPro:   IPR000808 [H]

Pfam domain/function: PF10609 ParA [H]

EC number: NA

Molecular weight: Translated: 37228; Mature: 37228

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIE
CCCHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHH
ELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSAN
HHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHH
LAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQIIPVETHGIQMISMDFFVEQ
EEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEC
GEPVIWRGPMLGKMIKMFLEEVRWGKPDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTP
CCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHCCCCCCEEEECC
HYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLL
CHHHHHHHHHCCEEEECCCCEEEEEEECCEEEEECCCEEEEEEECCCCCEEECCCCEEEE
IQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS
EEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIE
CCCHHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHH
ELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSAN
HHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHH
LAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQIIPVETHGIQMISMDFFVEQ
EEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEC
GEPVIWRGPMLGKMIKMFLEEVRWGKPDYLLIDLPPGTGDVALDIHTLIPKCNELIVTTP
CCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHCCCCCCEEEECC
HYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLL
CHHHHHHHHHCCEEEECCCCEEEEEEECCEEEEECCCEEEEEEECCCCCEEECCCCEEEE
IQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS
EEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559346; 8969501; 9384377; 2517635 [H]