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The map label for this gene is ssb [H]

Identifier: 226225071

GI number: 226225071

Start: 2574374

End: 2574739

Strand: Reverse

Name: ssb [H]

Synonym: Lm4b_02492

Alternate gene names: 226225071

Gene position: 2574739-2574374 (Counterclockwise)

Preceding gene: 226225072

Following gene: 226225070

Centisome position: 88.4

GC content: 34.15

Gene sequence:

>366_bases
ATGATTAATCAAGTAACTTTAGTAGGCAGATTAACTAAGGAACCAGAATTGAAATGGACCGCGGAAGACAGGGCTGTTTT
GAATTTAACCTTGGCTTTAAATCGGTTTGGTAAAAATAAAAGAGTTGATAATGATGCTGACTTTATTCAATGTGTTATTT
GGGGTAAAAGAGCAGAGGCCACTGCAGAGTTCTGTGCTAAAGGACAATTAGTAGGAGTAGTTGGCGAACTACAATCTCGG
AATTATTTAAATAAAGAAGAACAGAAAATTTATATTACGGAAGTTTTAGTTCATCAGATTCGGTATTTATCAAGTCGAAA
TAAAGATGAAAGAGTAGTTAATATACCTCAAGAAGAGGATGAATGA

Upstream 100 bases:

>100_bases
TTTGGAAGGTTTCTACCTAGTGAAAATACAGTTTTAGCTATTTTACAATAAACTTTTTATCTAATACAATCGCTTTACAT
CAAAAGAAAGAGGCGATTAT

Downstream 100 bases:

>100_bases
TGTAATACTTTGTTATAAAGAGCCATATTTCATAATGAATTTTAAAAATCCCACCCCAAAAAACAACAAAATCAATAAAT
TATCAGCTCAATTTGTAATG

Product: single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MINQVTLVGRLTKEPELKWTAEDRAVLNLTLALNRFGKNKRVDNDADFIQCVIWGKRAEATAEFCAKGQLVGVVGELQSR
NYLNKEEQKIYITEVLVHQIRYLSSRNKDERVVNIPQEEDE

Sequences:

>Translated_121_residues
MINQVTLVGRLTKEPELKWTAEDRAVLNLTLALNRFGKNKRVDNDADFIQCVIWGKRAEATAEFCAKGQLVGVVGELQSR
NYLNKEEQKIYITEVLVHQIRYLSSRNKDERVVNIPQEEDE
>Mature_121_residues
MINQVTLVGRLTKEPELKWTAEDRAVLNLTLALNRFGKNKRVDNDADFIQCVIWGKRAEATAEFCAKGQLVGVVGELQSR
NYLNKEEQKIYITEVLVHQIRYLSSRNKDERVVNIPQEEDE

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=33, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13961; Mature: 13961

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQVTLVGRLTKEPELKWTAEDRAVLNLTLALNRFGKNKRVDNDADFIQCVIWGKRAEA
CCCCEEEEEECCCCCCEEEECCCCEEEEHEEEHHHCCCCCCCCCCCCEEEEEEECCCCHH
TAEFCAKGQLVGVVGELQSRNYLNKEEQKIYITEVLVHQIRYLSSRNKDERVVNIPQEED
HHHHHHCCCEEEEEHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
E
C
>Mature Secondary Structure
MINQVTLVGRLTKEPELKWTAEDRAVLNLTLALNRFGKNKRVDNDADFIQCVIWGKRAEA
CCCCEEEEEECCCCCCEEEECCCCEEEEHEEEHHHCCCCCCCCCCCCEEEEEEECCCCHH
TAEFCAKGQLVGVVGELQSRNYLNKEEQKIYITEVLVHQIRYLSSRNKDERVVNIPQEED
HHHHHHCCCEEEEEHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]