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The map label for this gene is ybfF [C]

Identifier: 226225001

GI number: 226225001

Start: 2497825

End: 2498544

Strand: Reverse

Name: ybfF [C]

Synonym: Lm4b_02422

Alternate gene names: 226225001

Gene position: 2498544-2497825 (Counterclockwise)

Preceding gene: 226225002

Following gene: 226225000

Centisome position: 85.78

GC content: 37.08

Gene sequence:

>720_bases
ATGATTGCAGAAATCAATGGAATTAACTTGTTTTATCAAATAATCGGTAAAGGCGAACCAATCTTGCTTATTCACGGGAA
TGGTCAAAATCATCGTTCTTTAAAGCGGATGATTGATGACCTCTCTACTAATCATCAAGTAATCGCCGTAGATAGCCGCG
CACACGGGAAAAGTGAAGCGGGAAATACACCGCTTGATTTTGAAGTAATGGCGCTAGATATGCTTTCGTTACTCGATTAT
TTGAAAATTGATAAATATAAAGTTATCGGATATAGCGACGGCGGTATTGTTGCTCTCGTAATGGGGAAATTGCAACCGAA
CCGTCAAATCGCATCCGTTGTTATTGGAACAAACTATCATGTAAATCAAATACGATTTTTACCAGATTTATTTTGTCGTG
TCGCCTACGGGGCTGCATTTCTTTTAGCGCCATTTAGTCGCTTTTTTGAGCGGATGAAACGACAACTTGCTTTAACGATT
TATCATCCACATATGTCAGAAGCGGATTTGCAAAAAATAAGCGCGCCACTTTTAGCTGTTGTGGGTGAATATGATTTAAT
ATCTTCCAAAGATACAAAGAAAATGGTGCATTCTGTTCAACACGGTGAAATGGTTATTGTAAGAAATGGACTTCATTATT
TACCAAGGCAAAAACCGAAACAATTGTTACAATTAATTCATAGTTTCTTTTCTAATTTAAGCGCAGAAATTCACAAATGA

Upstream 100 bases:

>100_bases
AGGCGTATTTTAATGAAAATGGAAGCTTTTTTATAGGAAATCAAGTATAATCAGGTGTAAAATAAGGGTAGAAAATGTTT
TCAGCAAGGAGAAATGCTAT

Downstream 100 bases:

>100_bases
AACCTCCGGAAAAGCCTTTGGTAGCAACGTGTTTGAGCTTTGTGAAAAAAGTGTTTGACAAGTTCCTTGGATAGCGTTAA
TATTGGTCTATTGGTCAGAA

Product: lipolytic enzyme

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Oxidoreductase; Lipolytic; Peroxidase Protein; Fold Family Alpha/Beta Hydrolase; Esterase/Lipase; Alpha/Beta Superfamily Hydrolase; Hydrolase Protein; Arylesterase; Hydrolase Alpha/Beta Fold Family; Peroxidase; Hydrolase Alpha/Beta Fold Family Protein; Oxidoreductase Protein; Alpha/Beta Superfamily Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Hydrolase Or Acyltransferase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTNHQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDY
LKIDKYKVIGYSDGGIVALVMGKLQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTI
YHPHMSEADLQKISAPLLAVVGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQKPKQLLQLIHSFFSNLSAEIHK

Sequences:

>Translated_239_residues
MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTNHQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDY
LKIDKYKVIGYSDGGIVALVMGKLQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTI
YHPHMSEADLQKISAPLLAVVGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQKPKQLLQLIHSFFSNLSAEIHK
>Mature_239_residues
MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTNHQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDY
LKIDKYKVIGYSDGGIVALVMGKLQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTI
YHPHMSEADLQKISAPLLAVVGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQKPKQLLQLIHSFFSNLSAEIHK

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 26932; Mature: 26932

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTNHQVIAVDSRAHGKSEA
CCEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
GNTPLDFEVMALDMLSLLDYLKIDKYKVIGYSDGGIVALVMGKLQPNRQIASVVIGTNYH
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCC
VNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTIYHPHMSEADLQKISAPLLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHH
VGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQKPKQLLQLIHSFFSNLSAEIHK
HCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTNHQVIAVDSRAHGKSEA
CCEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
GNTPLDFEVMALDMLSLLDYLKIDKYKVIGYSDGGIVALVMGKLQPNRQIASVVIGTNYH
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCC
VNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTIYHPHMSEADLQKISAPLLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHH
VGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQKPKQLLQLIHSFFSNLSAEIHK
HCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA