| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224902
Identifier: 226224902
GI number: 226224902
Start: 2389886
End: 2390416
Strand: Reverse
Name: 226224902
Synonym: Lm4b_02321
Alternate gene names: NA
Gene position: 2390416-2389886 (Counterclockwise)
Preceding gene: 226224903
Following gene: 226224901
Centisome position: 82.07
GC content: 32.96
Gene sequence:
>531_bases ATGAGAAAGTTATACACGTATTTCGTTTTAATTCTCGGTGTGGCGATGATTGGTCTTGGAATTTATTTAATGTTTAATCC AAGTACTTCACTGCAAGCACTAACTATTTTTATTGGGATTATTTTAGTTTTAAATGGGATTAATGAAGTGATTTCTTATT TTGGAGAACAAAAATATTGGAGTATTTCCAAATGGATAATGTTTGATGGGATTTTATCAATCCTTATTGGTGGATTTGCT ATTTTCGAGTCAAATATGGCGGAACGTGTTTTCATTATTATATTCGCGATTTGGATACTAGCTTCAGCGATATTACGTAT TTTAACGGCGTTTGCTGTAAAAGGTTTCCCAGGATGGACAGTACTACTTATCATGGGAATTATAGGATTGATTATTGCTG TTATTTCCTTGTTCACAAACATGCTAGTAGCGATTGCAGTTGGGATTATACTTGGAATATTTTTCATTTTTCAAGGTATT ACATGTCTTTCTCTTTGGTGGGTTATTCGAAAAGGTGAATCTCGGAAATAA
Upstream 100 bases:
>100_bases TTGTCCAGCGTCGATTTTACGTAACCATCCGAATGTCGTATTTATTATTGATGAAGCGGCAGGGTCATTACTTACTAATC ACTAAAAAGGGGGCAAAACC
Downstream 100 bases:
>100_bases AGATAATTTTTTATATTGTTTTCTGTTAAAATGCTAAGAAAATTACATTAATAAAACTGAAAAAGTGATTTTGTCACAAA ATGGACATAAGAAGCGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVLNGINEVISYFGEQKYWSISKWIMFDGILSILIGGFA IFESNMAERVFIIIFAIWILASAILRILTAFAVKGFPGWTVLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGI TCLSLWWVIRKGESRK
Sequences:
>Translated_176_residues MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVLNGINEVISYFGEQKYWSISKWIMFDGILSILIGGFA IFESNMAERVFIIIFAIWILASAILRILTAFAVKGFPGWTVLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGI TCLSLWWVIRKGESRK >Mature_176_residues MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVLNGINEVISYFGEQKYWSISKWIMFDGILSILIGGFA IFESNMAERVFIIIFAIWILASAILRILTAFAVKGFPGWTVLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGI TCLSLWWVIRKGESRK
Specific function: Unknown
COG id: COG3247
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19669; Mature: 19669
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVLNGINEVISYFGEQKYW CHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SISKWIMFDGILSILIGGFAIFESNMAERVFIIIFAIWILASAILRILTAFAVKGFPGWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGITCLSLWWVIRKGESRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVLNGINEVISYFGEQKYW CHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SISKWIMFDGILSILIGGFAIFESNMAERVFIIIFAIWILASAILRILTAFAVKGFPGWT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGITCLSLWWVIRKGESRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA