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The map label for this gene is yitU [H]

Identifier: 226224871

GI number: 226224871

Start: 2355424

End: 2356269

Strand: Direct

Name: yitU [H]

Synonym: Lm4b_02290

Alternate gene names: 226224871

Gene position: 2355424-2356269 (Clockwise)

Preceding gene: 226224867

Following gene: 226224878

Centisome position: 80.87

GC content: 38.77

Gene sequence:

>846_bases
TTGAACCAACCATATGAATTAAAGGAGCAAACTATGTCTAAAAAATTAATCGTACTAGATCTTGATGGAACAACACTTAG
AGATGATTTAACTATCTCCTCCCATACAAAAAAAACTTTAGAAAAAGCCCGCATGGCCGGTCACGAAGTAATGATTGCAA
CGGGACGCCCATATCGAATAAGTGGCTCTTATTACCATGAACTCGGATTAACAACGCCGATTGTAAATTTCAACGGTGCC
GTCTATCACCATCCTAGACTTACTACCTTCGCTGAGGGCTATCATCATGCCATTGATTTACAAGTTGTTCATGAGTTACT
CGATTTTTCAAACGGCTTTTCATTAGATAATATCGCAGCAGAGGTGCAAGATAATGTCTTCTTAAAAGAACGAAACAACA
GCGTTCCTGAAACATTCCACTTAGGCACTGAAAACATTGTCTTTGGAAACATCCGTGATGCTATTAAATCAGATGCTACT
TCTTTACTGTTTTTTGGAAAAATTGACCAACTTGATTTAATTAGCAAACACTTGGATGAATCTCTTTCCGGCGTTATTTC
TCACCATACATGGGGAGCATCTGCTTGGCCAGCCGTTGAAATTATTAAATTCGGTATTCATAAAGCTATTGGCGTGCAAG
CAGCGGCTAAAACACTCGGCTTTGATCGTAAAGATATCATTGCATTTGGCGATGAAACGAATGATTTACAAATGCTTGAT
TACGCTGGTGTTGGGGTTGCTATGGGAAATGCTGCCGAGTCTGTTAAAAATGTGGCAAACGTGGTAACTGCTTCTAATCA
AGATGATGGTATAGCACTCTATTTAGAAGAAAACTTAAACCTATAA

Upstream 100 bases:

>100_bases
TTGAGTTTATTAAGCTACTGTAAAGGTCGGAATCATTTACAAATTTGTGATAAACGTCTATCATTGATGTGTGCCCTTAT
TTTAGCATGAAGGGGCAGCT

Downstream 100 bases:

>100_bases
TAAAAAGCTGCAAGTAAGGTCTTACAAAAGTTAGGAATGCTAATTTTTGATTCAAGAGCCATTACTTTGCAGCTTTTTTA
CATCATTTTATTTTTATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKARMAGHEVMIATGRPYRISGSYYHELGLTTPIVNFNGA
VYHHPRLTTFAEGYHHAIDLQVVHELLDFSNGFSLDNIAAEVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDAT
SLLFFGKIDQLDLISKHLDESLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKTLGFDRKDIIAFGDETNDLQMLD
YAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLEENLNL

Sequences:

>Translated_281_residues
MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKARMAGHEVMIATGRPYRISGSYYHELGLTTPIVNFNGA
VYHHPRLTTFAEGYHHAIDLQVVHELLDFSNGFSLDNIAAEVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDAT
SLLFFGKIDQLDLISKHLDESLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKTLGFDRKDIIAFGDETNDLQMLD
YAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLEENLNL
>Mature_281_residues
MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKARMAGHEVMIATGRPYRISGSYYHELGLTTPIVNFNGA
VYHHPRLTTFAEGYHHAIDLQVVHELLDFSNGFSLDNIAAEVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDAT
SLLFFGKIDQLDLISKHLDESLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKTLGFDRKDIIAFGDETNDLQMLD
YAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLEENLNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=281, Percent_Identity=33.8078291814947, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786982, Length=277, Percent_Identity=28.5198555956679, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI48994981, Length=273, Percent_Identity=27.1062271062271, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787043, Length=265, Percent_Identity=28.6792452830189, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081790, Length=266, Percent_Identity=26.6917293233083, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30952; Mature: 30952

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKARMAGHEVMIATGRPYRI
CCCCHHHHHHHCCCEEEEEECCCCEECCCCEECHHHHHHHHHHHHCCCEEEEECCCCEEE
SGSYYHELGLTTPIVNFNGAVYHHPRLTTFAEGYHHAIDLQVVHELLDFSNGFSLDNIAA
CCCEEEECCCCCCEEECCCEEEECCCCHHHHCCHHHEEHHHHHHHHHHCCCCCCHHHHHH
EVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDATSLLFFGKIDQLDLISKHLDE
HHHCCEEEEECCCCCCCEEECCCCCEEECCHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
SLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKTLGFDRKDIIAFGDETNDLQMLD
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEE
YAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLEENLNL
ECCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKARMAGHEVMIATGRPYRI
CCCCHHHHHHHCCCEEEEEECCCCEECCCCEECHHHHHHHHHHHHCCCEEEEECCCCEEE
SGSYYHELGLTTPIVNFNGAVYHHPRLTTFAEGYHHAIDLQVVHELLDFSNGFSLDNIAA
CCCEEEECCCCCCEEECCCEEEECCCCHHHHCCHHHEEHHHHHHHHHHCCCCCCHHHHHH
EVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDATSLLFFGKIDQLDLISKHLDE
HHHCCEEEEECCCCCCCEEECCCCCEEECCHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
SLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKTLGFDRKDIIAFGDETNDLQMLD
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEE
YAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLEENLNL
ECCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]