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The map label for this gene is arpJ

Identifier: 226224858

GI number: 226224858

Start: 2345554

End: 2347014

Strand: Direct

Name: arpJ

Synonym: Lm4b_02277

Alternate gene names: 226224858

Gene position: 2345554-2347014 (Clockwise)

Preceding gene: 226224857

Following gene: 226224859

Centisome position: 80.53

GC content: 38.67

Gene sequence:

>1461_bases
ATGCAGAAGCATTTATTACAAAAGATTGCAGCAATTTTACTTGTTTTTATAGTTGTATTTTCTGGCTTCACAACTGTGTT
CGCCGCTGATACAGAAGATCAAACTTTAGCTAAAATTCAAGAAAAAGGTGTTTTAACGGTCGGCCTTTCCGCTGACTATC
CACCGTATGAATTTCATCAAACAATCGACGGTAAAGATAAAGTCGTTGGTTTTGATGTAAGTATTGCGGAAAAAATTGCC
AAAGATTTAGATGTTAAATTAGAAATTAAAGAAATGAATTTCGACAGCTTGCTTGGCTCACTAAAAACTGGCAAGATTGA
TATGATTATTTCCGGGATGTCACCTACACCCGAACGTCAAAAAGAAGTGGATTTCTCTGATCCATACATGTTCGTTCAGC
AACGTGTTGTGATTAGAAAGACAGATAAAGATAAATTTACAAGTGTGAATGATTTTAGTGGCGTGAAAGTTGGTGCCCAA
AAGCAAACGACACAAGAAGAATTAGCTCAAAATGAGCTAGTTGGTTCAGAAGTAGTTTCCCTTCAAAAAGTACCGGACCT
TATTCTTAACCTTAAAAGCAACAAAGTCGATGCGGTTGTTTTAGAAGGTCCAGTTGCTGAAGCTTATATTAGTCAAGATA
AGACACTCGCTATGGCGGATATCAAATTTGCTAATGGTAGCAAAGAAACCGCCATCGCAATGCCAAAAGGTTCCACTGCT
TTACAAGAAAAAGTCAACGCTTCTATTAAAGATATACAAGATACTGGCTTACTGAAAAAATATCAAAAAGAAGCCAATAA
ATTAATGTTCCAAGATGGTAGCTTTTACGAGAAATATGGTAATTACTTTATCACTGGTACATTAATCACTATTGCCCTTG
CCGCTATCGGTGTATTATGTGGTGCCATTCTCGGCTCATTACTAGCGCTCATGAAACTGGCGAAAACAAGATGGTTACGC
TGGCCAGCAGCATGTTATATTGAATTTGTCCGTGGTACGCCACTTCTAATTCAAATTTTCATCGTCTTTTTCGGAACTCA
AATTATCGGTATGGACGTATCCGCCTTTGTTTCTGGTTGTATCGCCCTATCGCTAAACAGTGCCGCTTATGTTGCTGAAA
TTATCCGCGCAGGTATTTCTGCTGTCAACAAAGGTCAAATGGAAGCAGCTCGTTCCCTTGGTATGACACAAGGCGCTAGC
ATGCGTTACATCATCTTACCGCAAGCCGTGAAAAATATTCTTCCTGCTCTTGGGAATGAATTCGTCACTGTTATTAAAGA
ATCTTCCATCGTATCCGTTATTGGTGTAACAGAACTAATGTTTATGACCGGCGTAGTCCAAGGCGCAAGCTTCAAGCCAT
TTATTCCGCTAATCATTACATCGTTAATTTACTTTGTACTAACATTTAGCTTATCAAGACTACTAGGTGTTGCTGAAAGG
AGAATGAGAACAAGTGATTGA

Upstream 100 bases:

>100_bases
AACATATTGCATATTTACTCATTTTGATGTATTATAATAAACATCGATAATAACGATTCATTGATTATAAATTACTCAAA
TACTAAAGGGAGTTGTACTT

Downstream 100 bases:

>100_bases
TATTAAAAATTTACACAAACATTTTGGCAAATTAGAAGTCTTAAAAGGTATTGATCTTGAAATCGCATCTGGAGAAGTGG
TCGTAGTTATCGGCCCTTCC

Product: amino acid ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQTIDGKDKVVGFDVSIAEKIA
KDLDVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTPERQKEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQ
KQTTQEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKETAIAMPKGSTA
LQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLR
WPAACYIEFVRGTPLLIQIFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGAS
MRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAER
RMRTSD

Sequences:

>Translated_486_residues
MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQTIDGKDKVVGFDVSIAEKIA
KDLDVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTPERQKEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQ
KQTTQEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKETAIAMPKGSTA
LQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLR
WPAACYIEFVRGTPLLIQIFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGAS
MRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAER
RMRTSD
>Mature_486_residues
MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQTIDGKDKVVGFDVSIAEKIA
KDLDVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTPERQKEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQ
KQTTQEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKETAIAMPKGSTA
LQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLR
WPAACYIEFVRGTPLLIQIFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGAS
MRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAER
RMRTSD

Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=193, Percent_Identity=39.8963730569948, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1788228, Length=225, Percent_Identity=31.5555555555556, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=31.5315315315315, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=32.0197044334975, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1787087, Length=204, Percent_Identity=29.4117647058824, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1787088, Length=217, Percent_Identity=30.8755760368664, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1788645, Length=236, Percent_Identity=29.2372881355932, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=31.4285714285714, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787031, Length=215, Percent_Identity=31.1627906976744, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788646, Length=207, Percent_Identity=30.9178743961353, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI87082239, Length=230, Percent_Identity=30, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=26.605504587156, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI48994930, Length=178, Percent_Identity=33.1460674157303, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1787086, Length=206, Percent_Identity=28.1553398058252, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788649, Length=233, Percent_Identity=27.8969957081545, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 53117; Mature: 53117

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHC
TIDGKDKVVGFDVSIAEKIAKDLDVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTPERQ
CCCCCCCEEEECHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCHH
KEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNELVGSEVVS
CCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH
LQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKETAIAMPKGSTA
HHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCEEECCCCCHH
LQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALAAIGVLC
HHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCEEEEHHHHHHHHHHHHHHH
GAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQIFIVFFGTQIIGMDVSAFVSGC
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
IALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGNE
HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCH
FVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAER
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMRTSD
HHCCCC
>Mature Secondary Structure
MQKHLLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADYPPYEFHQ
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHHC
TIDGKDKVVGFDVSIAEKIAKDLDVKLEIKEMNFDSLLGSLKTGKIDMIISGMSPTPERQ
CCCCCCCEEEECHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCHH
KEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELAQNELVGSEVVS
CCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH
LQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGSKETAIAMPKGSTA
HHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCEEECCCCCHH
LQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALAAIGVLC
HHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCCEEEEHHHHHHHHHHHHHHH
GAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQIFIVFFGTQIIGMDVSAFVSGC
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
IALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGNE
HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCH
FVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAER
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMRTSD
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA